Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20633
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.24 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.0  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +2

Query: 443 CSFTTLLHVSVITESLILNGQLVIITIA*YAFPVRLSYLNRPSSRVLHLYFKFLLNRSL* 622
           C  TT L + + T  +ILN QL  IT+  +A   + + L +  +  LH +   L+ R   
Sbjct: 181 CYLTTELVLMLQTRFVILNKQLTKITVKNFATKTQSAVLGKICT--LHHHLSKLVTR--- 235

Query: 623 LHHIFSLQFL 652
            + IF L  L
Sbjct: 236 FNEIFGLGLL 245


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 97  IVSTKVVYLNGDNVTVYLCAIERAVG 20
           +  T +++ N   +T  LC I  AVG
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAVG 189


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 97  IVSTKVVYLNGDNVTVYLCAIERAVG 20
           +  T +++ N   +T  LC I  AVG
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAVG 189


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 210 HPSTANKNPSCIHYK 166
           +PS  N++ SC HY+
Sbjct: 361 YPSYYNQDVSCTHYQ 375


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 541  WECVLCYGYYDQ 506
            W  V+CY Y+ Q
Sbjct: 2009 WIAVMCYDYHGQ 2020


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 74  VHHFSTYDGITSYKKTNL 127
           V+  +TYD    YK TN+
Sbjct: 337 VYTTATYDSFMIYKTTNI 354


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 74  VHHFSTYDGITSYKKTNL 127
           V+  +TYD    YK TN+
Sbjct: 62  VYTTATYDSFMIYKTTNI 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,292
Number of Sequences: 336
Number of extensions: 2429
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)