Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20630
         (689 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030641-1|AAH30641.1|  518|Homo sapiens motile sperm domain con...    71   4e-12
AK093075-1|BAC04043.1|  455|Homo sapiens protein ( Homo sapiens ...    71   4e-12
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 31   3.9  

>BC030641-1|AAH30641.1|  518|Homo sapiens motile sperm domain
           containing 2 protein.
          Length = 518

 Score = 70.9 bits (166), Expect = 4e-12
 Identities = 27/58 (46%), Positives = 46/58 (79%)
 Frame = +1

Query: 511 MDMELIKYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
           +DM+ ++++I  FK YYP +L+ I+I++MPW+++AAFK+VKT L  +AV  +KF +K+
Sbjct: 159 IDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKN 216



 Score = 63.3 bits (147), Expect = 8e-10
 Identities = 25/86 (29%), Positives = 52/86 (60%)
 Frame = +2

Query: 254 ENVGASNINEDNIRMDYVKEGVFFPRGRDVDGSLLLVFKSKMHIKGQRDYDELKKIMIYW 433
           + +  +++NE +I    ++ GV +  G D +G+ L   + K H+K Q+   + KK++ +W
Sbjct: 73  KEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQKTILDKKKLIAFW 132

Query: 434 FDRVEREENGKKISMFFDMDGTGLST 511
            +R  + ENGK +++ FD+  TG+++
Sbjct: 133 LERYAKRENGKPVTVMFDLSETGINS 158


>AK093075-1|BAC04043.1|  455|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35756 fis, clone TESTI2004687. ).
          Length = 455

 Score = 70.9 bits (166), Expect = 4e-12
 Identities = 27/58 (46%), Positives = 46/58 (79%)
 Frame = +1

Query: 511 MDMELIKYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
           +DM+ ++++I  FK YYP +L+ I+I++MPW+++AAFK+VKT L  +AV  +KF +K+
Sbjct: 96  IDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKN 153



 Score = 63.3 bits (147), Expect = 8e-10
 Identities = 25/86 (29%), Positives = 52/86 (60%)
 Frame = +2

Query: 254 ENVGASNINEDNIRMDYVKEGVFFPRGRDVDGSLLLVFKSKMHIKGQRDYDELKKIMIYW 433
           + +  +++NE +I    ++ GV +  G D +G+ L   + K H+K Q+   + KK++ +W
Sbjct: 10  KEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQKTILDKKKLIAFW 69

Query: 434 FDRVEREENGKKISMFFDMDGTGLST 511
            +R  + ENGK +++ FD+  TG+++
Sbjct: 70  LERYAKRENGKPVTVMFDLSETGINS 95


>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 283 GQHTHGLC*RRCLLPAGQRRGWQSPPRLQIQNAHQ 387
           GQH HG+C    + P  +R GWQ P     QN  Q
Sbjct: 363 GQHYHGMCLDIAVTPL-KRAGWQCPECKVCQNCKQ 396


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,324,660
Number of Sequences: 237096
Number of extensions: 2604552
Number of successful extensions: 5020
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5020
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)