Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20630
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36640.1 68417.m05200 SEC14 cytosolic factor family protein /... 39 0.004
At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /... 38 0.006
At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /... 38 0.006
At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /... 38 0.006
At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /... 36 0.025
At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative / poly... 34 0.10
At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /... 33 0.24
At1g74740.1 68414.m08660 calcium-dependent protein kinase, putat... 32 0.31
At2g19630.1 68415.m02293 F-box family protein contains F-box dom... 31 0.54
At2g38910.1 68415.m04783 calcium-dependent protein kinase, putat... 30 1.3
At1g55840.1 68414.m06404 SEC14 cytosolic factor (SEC14) / phosph... 30 1.3
At5g65140.1 68418.m08194 trehalose-6-phosphate phosphatase, puta... 30 1.7
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 30 1.7
At1g22210.1 68414.m02777 trehalose-6-phosphate phosphatase, puta... 29 2.2
At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative / phos... 29 2.2
At3g01640.1 68416.m00095 GHMP kinase family protein contains GHM... 29 2.9
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 29 3.8
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 29 3.8
At3g51850.1 68416.m05686 calcium-dependent protein kinase, putat... 29 3.8
At1g35670.1 68414.m04435 calcium-dependent protein kinase 2 (CDP... 29 3.8
At5g23580.1 68418.m02767 calcium-dependent protein kinase 9 (CDP... 28 5.1
At4g35310.1 68417.m05019 calcium-dependent protein kinase, putat... 28 5.1
At4g09570.1 68417.m01575 calcium-dependent protein kinase, putat... 28 5.1
At2g17290.1 68415.m01997 calcium-dependent protein kinase isofor... 28 5.1
At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDP... 28 5.1
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 28 6.7
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 28 6.7
At5g60770.1 68418.m07625 high-affinity nitrate transporter, puta... 28 6.7
At3g51670.1 68416.m05666 SEC14 cytosolic factor family protein /... 28 6.7
At5g58410.1 68418.m07314 expressed protein contains similarity t... 27 8.9
At4g38230.1 68417.m05399 calcium-dependent protein kinase, putat... 27 8.9
At1g78090.1 68414.m09100 trehalose-6-phosphate phosphatase (TPPB... 27 8.9
>At4g36640.1 68417.m05200 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max, SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 294
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 517 MELIKYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFV 675
M+ + +I + + YYP L +YN P + A ++ K L + EK+KFV
Sbjct: 159 MKTTREIIHILQNYYPERLGIAFLYNPPRLFQAVYRAAKYFLDPRTAEKVKFV 211
>At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 556 YYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
+YP L I+YN P + + +K+VK L K K+KFV D
Sbjct: 111 HYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSD 153
>At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 314
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 556 YYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
+YP L I+YN P + + +K+VK L K K+KFV D
Sbjct: 176 HYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSD 218
>At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 556 YYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
+YP L I+YN P + + +K+VK L K K+KFV D
Sbjct: 111 HYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSD 153
>At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 296
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 538 ITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFV 675
I + + +YP L +YN P + A +K+VK + AK K+KFV
Sbjct: 169 INILQNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFV 214
>At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative /
polyphosphoinositide-binding protein, putative similar
to polyphosphoinositide binding protein SEC14 homolog
Ssh1p (GI:2739044) {Glycine max}
Length = 341
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 517 MELIKYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKM 666
++L+ + T+ YP N + N P++ SA +KVVK LL + +K+
Sbjct: 169 IKLVTIISTIDDLNYPEKTNTYYVVNAPYIFSACWKVVKPLLQERTRKKV 218
>At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650: CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
[Glycine max]; similar to SEC14-like protein (GB:U82515)
[D. discoideum]
Length = 301
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 556 YYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFVTKD 684
+YP L + ++YN P +KV + L K K+KFV D
Sbjct: 173 HYPERLAFAVLYNPPKFFEPFWKVARPFLEPKTRNKVKFVYSD 215
>At1g74740.1 68414.m08660 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Arabidopsis thaliana] gi|604880|dbj|BAA04829;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 541
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 356 LLVFKSKMHIKGQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTG 502
LL+ + ++ G DY E ++I+ ++E +E+ ++ MFFD DG+G
Sbjct: 403 LLMEVADVNGNGCLDYGEFVAVIIH-LQKMENDEHFRQAFMFFDKDGSG 450
>At2g19630.1 68415.m02293 F-box family protein contains F-box domain
Pfam:PF00646
Length = 297
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 262 DIFLQVRMSHSMSAACLASFSQWASTLFR-YFSSLVRSKSAGWKSTSFSLRRFS 104
+IFL R+S + A C QWASTL R YF+ L ++S F+ R+ S
Sbjct: 24 EIFL--RLSVNSIARCRCVSKQWASTLSRPYFTELFLTRSLARPKLLFAYRKGS 75
>At2g38910.1 68415.m04783 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase, isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 583
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 NEDNIRMDYVKEGVFFPRGRDVDGSLLLVFKSKMHI--KGQRDYDELKKIMIYWFDRVER 451
N +I ++ +K+G+ G D+ S +L I G DY E M++ +++E+
Sbjct: 451 NSGHITLEELKKGLDRV-GADLKDSEILGLMQAADIDNSGTIDYGEFIAAMVH-LNKIEK 508
Query: 452 EENGKKISMFFDMDGTGLST 511
E++ +FD DG+G T
Sbjct: 509 EDHLFTAFSYFDQDGSGYIT 528
>At1g55840.1 68414.m06404 SEC14 cytosolic factor (SEC14) /
phosphoglyceride transfer protein similar to
polyphosphoinositide binding protein SEC14 homolog Ssh1p
(GB:AAB94598) [Glycine max]; identified in Eur J Biochem
1998 Dec 1;258(2):402-10 as AtSEC14, characterized by
functional complementation in S. cerevisiae.
Length = 325
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 517 MELIKYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMK 669
++L+ + T+ YP + N+P++ SA +K +K LL + +K++
Sbjct: 169 IKLMTAITTIDDLNYPEKTETYYVVNVPYIFSACWKTIKPLLQERTKKKIQ 219
>At5g65140.1 68418.m08194 trehalose-6-phosphate phosphatase,
putative similar to trehalose-6-phosphate phosphatase
(AtTPPB) [Arabidopsis thaliana] GI:2944180; contains
Pfam profile PF02358: Trehalose-phosphatase
Length = 370
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 434 FDRVEREENGKKISMFFDMDGT 499
F+R+ E GK+I MF D DGT
Sbjct: 104 FERIIEEARGKQIVMFLDYDGT 125
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 529 KYLITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKF 672
K + L + YP F++ I N+PW A ++++ + ++ K+ F
Sbjct: 474 KQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPFMSQRSKSKLVF 521
>At1g22210.1 68414.m02777 trehalose-6-phosphate phosphatase,
putative similar to trehalose-6-phosphate phosphatase
(AtTPPB) GI:2944180 from [Arabidopsis thaliana];
contains Pfam profile PF02358: Trehalose-phosphatase
Length = 320
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 434 FDRVEREENGKKISMFFDMDGT 499
F+++ R+ GK+I MF D DGT
Sbjct: 55 FEQIMRDAEGKQIIMFLDYDGT 76
>At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain and PF03765 : CRAL/TRIO,
N-terminus; similar to polyphosphoinositide binding
protein Ssh2p GB:AAB94599 GI:2739046 from [Glycine max]
Length = 255
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 535 LITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFV 675
L TL CY P L + I + P++ A+KV+ + A +K+ FV
Sbjct: 176 LSTLQDCY-PERLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFV 221
>At3g01640.1 68416.m00095 GHMP kinase family protein contains GHMP
kinases putative ATP-binding protein domain,
Pfam:PF00288
Length = 362
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 12 LTQFKTISCCLQ*YNRFISNHGYCGGR------AEIFENRLKENDVDFHPADLERTRD 167
L QF ++ L NR + N GY GG ++F N KEND+ H A+ + D
Sbjct: 69 LVQFTSLDHLL---NR-LQNEGYYGGVRLLMAICKVFRNYCKENDIQLHQANFSLSYD 122
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = -2
Query: 355 ETAIHVSAPREEDTFFNIVHAYVVLVD------VGSSDIFLQVRMSHSMSAACLASFSQW 194
E+ +++ E+T FN+ HA L D +G + L++++ +S+ + S W
Sbjct: 452 ESVMYIQRLTSEETLFNVWHAISELQDHVTRQRIGLQQLKLEIKL-NSLLNDQMVSLEDW 510
Query: 193 ASTLFRYFSSLV 158
A+ + SSLV
Sbjct: 511 ATLERDHVSSLV 522
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = -2
Query: 355 ETAIHVSAPREEDTFFNIVHAYVVLVD------VGSSDIFLQVRMSHSMSAACLASFSQW 194
E+ +++ E+T FN+ HA L D +G + L++++ +S+ + S W
Sbjct: 452 ESVMYIQRLTSEETLFNVWHAISELQDHVTRQRIGLQQLKLEIKL-NSLLNDQMVSLEDW 510
Query: 193 ASTLFRYFSSLV 158
A+ + SSLV
Sbjct: 511 ATLERDHVSSLV 522
>At3g51850.1 68416.m05686 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 528
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 386 KGQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTG 502
KG DY E + ++ +V +E+ +K +FD DG G
Sbjct: 408 KGTLDYGEFVAVSLH-LQKVANDEHLRKAFSYFDKDGNG 445
>At1g35670.1 68414.m04435 calcium-dependent protein kinase 2 (CDPK2)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604881|dbj|BAA04830; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 495
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E ++ +++EREEN +FD DG+G T
Sbjct: 381 GTIDYGEFLAATLH-MNKMEREENLVAAFSYFDKDGSGYIT 420
>At5g23580.1 68418.m02767 calcium-dependent protein kinase 9 (CDPK9)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|836938|gb|AAA67653; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 490
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E I+ +++EREEN FFD D +G T
Sbjct: 377 GTIDYGEFLAATIH-LNKLEREENLVAAFSFFDKDASGYIT 416
>At4g35310.1 68417.m05019 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 6 [Arabidopsis thaliana]
gi|1399275|gb|AAB03246; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 556
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E I+ +++EREE+ +FD DG+G T
Sbjct: 452 GTIDYSEFIAATIH-LNKLEREEHLVAAFQYFDKDGSGFIT 491
>At4g09570.1 68417.m01575 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 501
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E ++ +++EREEN +FD DG+G T
Sbjct: 380 GTIDYGEFLAATLH-INKMEREENLVVAFSYFDKDGSGYIT 419
>At2g17290.1 68415.m01997 calcium-dependent protein kinase isoform 6
(CPK6) identical to calmodulin-domain protein kinase
CDPK isoform 6 [Arabidopsis thaliana]
gi|1399275|gb|AAB03246; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 544
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E I+ +++EREE+ +FD DG+G T
Sbjct: 440 GTIDYSEFIAATIH-LNKLEREEHLVSAFQYFDKDGSGYIT 479
>At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDPK1)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 545
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGT 499
G DY E ++I+ ++E +E K MFFD DG+
Sbjct: 418 GFLDYGEFVAVIIH-LQKIENDELFKLAFMFFDKDGS 453
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 105 ENRLKENDVDFHPADLERTRDEKYLKRVLAHCEKDAKQAADMLWD 239
E LKE + + + ER R ++ L+ LA EK+ ++ A L D
Sbjct: 462 EEALKEAEKEVYLVSAERDRAQQDLQSALASLEKELEERAGALKD 506
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 105 ENRLKENDVDFHPADLERTRDEKYLKRVLAHCEKDAKQAADMLWD 239
E LKE + + + ER R ++ L+ LA EK+ ++ A L D
Sbjct: 462 EEALKEAEKEVYLVSAERDRAQQDLQSALASLEKELEERAGALKD 506
>At5g60770.1 68418.m07625 high-affinity nitrate transporter,
putative strong similarity to trans-membrane nitrate
transporter protein AtNRT2:1 [Arabidopsis thaliana]
GI:3747058, high-affinity nitrate transporter ACH1
[Arabidopsis thaliana] GI:3608362
Length = 527
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -2
Query: 274 VGSSDIFLQVRMSHSMSAACLASFSQWASTLFR-YFSSLVRSKSAGW 137
VG + ++ VR A S W ST+F LV +AGW
Sbjct: 148 VGGAGGYITVRFMIGFCLATFVSCQYWMSTMFNGQIIGLVNGTAAGW 194
>At3g51670.1 68416.m05666 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max};; contains Pfam PF00650 : CRAL/TRIO
domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 409
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 535 LITLFKCYYPYFLNYIIIYNMPWVLSAAFKVVKTLLPAKAVEKMKFV 675
+++LF+ YP + I N+PW S + + L + K KFV
Sbjct: 218 ILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPFLTQRT--KSKFV 262
>At5g58410.1 68418.m07314 expressed protein contains similarity to
hypothetical proteins
Length = 1873
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 134 VYIVFFETILKNLRTSAAVAMITDKTIISLKTTGYCLEL 18
++I+F E + AA MITDK I +T+ CL +
Sbjct: 1130 LHILFKEDLWGEEEAMAAFKMITDKLFIGEETSKNCLRI 1168
>At4g38230.1 68417.m05399 calcium-dependent protein kinase, putative
/ CDPK, putative calmodulin-domain protein kinase CDPK
isoform 6 [Arabidopsis thaliana] gi|1399275|gb|AAB03246;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 340
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 389 GQRDYDELKKIMIYWFDRVEREENGKKISMFFDMDGTGLST 511
G DY E I+ +++EREE+ +FD DG+G T
Sbjct: 235 GTIDYGEFIAATIH-LNKLEREEHLLSAFRYFDKDGSGYIT 274
>At1g78090.1 68414.m09100 trehalose-6-phosphate phosphatase (TPPB)
identical to trehalose-6-phosphate phosphatase (AtTPPB)
GI:2944180 [Arabidopsis thaliana]
Length = 374
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 434 FDRVEREENGKKISMFFDMDGT 499
FD + GK+I MF D DGT
Sbjct: 106 FDEIVNAAKGKQIVMFLDYDGT 127
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,823
Number of Sequences: 28952
Number of extensions: 367785
Number of successful extensions: 936
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -