Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20629
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 167 NDTRYNSGGRSYNTSRDRVDESYKKTYRNE 256
           N    N+GG ++ T+  ++     K +RN+
Sbjct: 81  NINSINTGGLTFETAAHKIMAGATKRFRNQ 110


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 140 HHGLHXFHNCLDC 102
           H G H FHN   C
Sbjct: 489 HMGYHGFHNPFTC 501


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 466 GIQLLADNLLSFAIHL 419
           GIQL+  NLL  +++L
Sbjct: 63  GIQLVVRNLLDISLYL 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,395
Number of Sequences: 336
Number of extensions: 2125
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)