Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20628
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase, cAMP-de...    33   0.85 
BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.      33   0.85 
J00260-1|AAB59421.1|  114|Homo sapiens immunoglobulin mu chain p...    32   2.0  
X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene...    31   2.6  
BC112145-1|AAI12146.1|  220|Homo sapiens Parkinson disease 7 dom...    30   7.9  
AK092816-1|BAC03983.1|  184|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AK091602-1|BAC03706.1|  220|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             30   7.9  

>BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase,
           cAMP-dependent, regulatory, type II, alpha protein.
          Length = 382

 Score = 33.1 bits (72), Expect = 0.85
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 361 ESAKVENRVRSGDVTGSYIYKDGKNDLVKVRYWSDRDGFHQEDNLPKVERNK 516
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE  + +  + +
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQEVEIARCHKGQ 312


>BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.
          Length = 382

 Score = 33.1 bits (72), Expect = 0.85
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 361 ESAKVENRVRSGDVTGSYIYKDGKNDLVKVRYWSDRDGFHQEDNLPKVERNK 516
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE  + +  + +
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQEVEIARCHKGQ 312


>J00260-1|AAB59421.1|  114|Homo sapiens immunoglobulin mu chain
           protein.
          Length = 114

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = +2

Query: 101 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNERKSRILRT 280
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H   +   +R+   
Sbjct: 32  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAH---DALPNRVTER 88

Query: 281 TLKKYTTRP 307
           T+ K T +P
Sbjct: 89  TVDKSTGKP 97


>X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene
           for IgM heavy chain exons CH1-4, secretory. ).
          Length = 129

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +2

Query: 101 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNERKSRILRT 280
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H       +R+   
Sbjct: 47  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAH---EALPNRVTER 103

Query: 281 TLKKYTTRP 307
           T+ K T +P
Sbjct: 104 TVDKSTGKP 112


>BC112145-1|AAI12146.1|  220|Homo sapiens Parkinson disease 7 domain
           containing 1 protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 289 LQRSPQYSRFPFVLP-VVSKSGACFDCTKPRVV 194
           L R+P ++R P V+   V  SGACF  ++P  V
Sbjct: 156 LVRAPGFARLPLVVEDFVKDSGACFSASEPDAV 188


>AK092816-1|BAC03983.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35497 fis, clone SMINT2008869. ).
          Length = 184

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 289 LQRSPQYSRFPFVLP-VVSKSGACFDCTKPRVV 194
           L R+P ++R P V+   V  SGACF  ++P  V
Sbjct: 120 LVRAPGFARLPLVVEDFVKDSGACFSASEPDAV 152


>AK091602-1|BAC03706.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34283 fis, clone FEBRA2003926, weakly similar to
           NonF. ).
          Length = 220

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 289 LQRSPQYSRFPFVLP-VVSKSGACFDCTKPRVV 194
           L R+P ++R P V+   V  SGACF  ++P  V
Sbjct: 156 LVRAPGFARLPLVVEDFVKDSGACFSASEPDAV 188


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +2

Query: 344  TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVTGQTVTVSTRKTTYLRS--SETS 517
            T T +P L  S  + +PET+ + ++   AKMIS+    G + TV    T+ + S  SETS
Sbjct: 2869 TSTTIPTLTIS--SDEPETTTSLVTHSEAKMISAIPTLGVSPTVQGLVTSLVTSSGSETS 2926


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,203,842
Number of Sequences: 237096
Number of extensions: 1849388
Number of successful extensions: 4282
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4282
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)