Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20628
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.006
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 35 0.042
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 33 0.17
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 30 1.6
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 2.8
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 2.8
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 28 4.9
L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 28 6.4
Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical pr... 27 8.5
U28412-3|AAC46594.2| 92|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical... 27 8.5
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +2
Query: 278 TTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 457
TT TT P TT PT T + + + P T+P +T T +++
Sbjct: 238 TTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTK 297
Query: 458 GQTVTVSTRKTTYLRSSETS 517
T T T KTT ++ T+
Sbjct: 298 STTTTTKTTKTTSTPTTTTT 317
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 35.1 bits (77), Expect = 0.042
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +2
Query: 257 RKSRILRTTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKM 436
+KS ++ TT KK + K + +P+ AS P+TSPA+ +T T +
Sbjct: 21 KKSSVIETTTKKTS---GIESKLLPNELPSTGTTGTSGVKNGASSPKTSPAKTTTTTTTV 77
Query: 437 ISSRYVTGQTVTVST---RKTTYLRSSETS 517
++ + T +ST RK T +S E S
Sbjct: 78 VTQKVSNQPTAPISTLPPRKPTAQKSRELS 107
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.17
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = +2
Query: 200 PRFRTVEAGPTLGHY--WKNERKSR----ILRTTLKKYTTRPNTTDKTV*VHMPTDTRLP 361
P R A P +G+ ++ ++K R + ++T+KK +P TT PT P
Sbjct: 101 PNKRAAAAPPWIGYTQTYQGQQKYRNPQKLQQSTIKK-RPKPETTSGPKKASKPTSLSEP 159
Query: 362 NLRRSKIASDPETSPARISTRTAKMISSRYVTGQTVTVSTRKTTYLRSSETSRRGSRCEA 541
I+ D S + A++ + + T K +SSET RR SR A
Sbjct: 160 KKTECSISEDELLSASLAERVQAEVSENEQIENLTEWAQAYKQKQEKSSETKRR-SRKTA 218
Query: 542 ARIASRKS 565
R +KS
Sbjct: 219 HREEEQKS 226
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 278 TTLKKYTTRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARIST 421
TTL+ TTRP TT KT T TR P + +K + P+T+ R+ T
Sbjct: 360 TTLQTTTTRPQTT-KTTTTPQTTTTR-P--QTTKTTTTPQTTTTRLQT 403
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 202 EVSYSRSRPHSWTLLEERKEIENTEDYVEEVYDASQY 312
+++YS R + W +L + IEN + +E+V++ Y
Sbjct: 1100 QINYSILRSNIWRILTDISRIENNDILIEKVWNRLSY 1136
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 202 EVSYSRSRPHSWTLLEERKEIENTEDYVEEVYDASQY 312
+++YS R + W +L + IEN + +E+V++ Y
Sbjct: 1100 QINYSILRSNIWRILTDISRIENNDILIEKVWNRLSY 1136
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 202 EVSYSRSRPHSWTLLEERKEIENTEDYVEEVYDASQY 312
+++YS R + W +L + IEN + +E+V++ Y
Sbjct: 1100 QINYSILRSNIWRILTDISRIENNDILIEKVWNRLSY 1136
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 EERKEIENTEDYVEEVYDAS-QYHGQDGLGAYAYGYQTPESAKVENRVRSGDVT 405
E+ E+E ED ++ +A Q +G + + + +TP S+ EN++ +G T
Sbjct: 361 EKTDELEELEDDDIQIIEAGDQGNGVEEVSSTVISVETPNSSSDENKIYNGHQT 414
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 EERKEIENTEDYVEEVYDAS-QYHGQDGLGAYAYGYQTPESAKVENRVRSGDVT 405
E+ E+E ED ++ +A Q +G + + + +TP S+ EN++ +G T
Sbjct: 358 EKTDELEELEDDDIQIIEAGDQGNGVEEVSSTVISVETPNSSSDENKIYNGHQT 411
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 EERKEIENTEDYVEEVYDAS-QYHGQDGLGAYAYGYQTPESAKVENRVRSGDVT 405
E+ E+E ED ++ +A Q +G + + + +TP S+ EN++ +G T
Sbjct: 361 EKTDELEELEDDDIQIIEAGDQGNGVEEVSSTVISVETPNSSSDENKIYNGHQT 414
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 EERKEIENTEDYVEEVYDAS-QYHGQDGLGAYAYGYQTPESAKVENRVRSGDVT 405
E+ E+E ED ++ +A Q +G + + + +TP S+ EN++ +G T
Sbjct: 358 EKTDELEELEDDDIQIIEAGDQGNGVEEVSSTVISVETPNSSSDENKIYNGHQT 411
>L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical
protein K02D10.5 protein.
Length = 277
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 241 LLEERKEIENTEDYVEEVYDASQ 309
LLE+R+++ENTE ++E++ +Q
Sbjct: 75 LLEQREKLENTEKNLDEIHRTTQ 97
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 464 TVTVSTRKTTYLRSSETSRRG-SRC 535
TVT+ T TTY+RS+ T+ R +RC
Sbjct: 528 TVTIETITTTYIRSTTTTPRSPARC 552
>Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical
protein F56H6.2 protein.
Length = 373
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Frame = +1
Query: 208 SYSRSRPHSWTLLEERKEIENTE----DYVEE---VYDASQYHGQDGLGAYAYGYQTP 360
S +RS+P W L+ E TE Y E +Y A +H DG G P
Sbjct: 153 STNRSKPRYWDLIPEMMNYSKTELGAIGYYSESVSLYHAMDHHRLDGSSGLVVGSMKP 210
>U28412-3|AAC46594.2| 92|Caenorhabditis elegans Hypothetical
protein T19C3.3 protein.
Length = 92
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 371 RSKIASDPETSPARISTRTAKMISSRYVTGQ 463
+S+I D SP+R RT +++S VTG+
Sbjct: 50 KSQIFDDVPASPSRTPKRTVQVVSRNPVTGE 80
>AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical
protein F46F5.11 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 259 EIENTEDYVEEVYDASQYHGQDG-LGAYAYGYQ-TPESAK-VENRVRSGDVTGSYIYKDG 429
+ N +Y+++ D Q + G + Y + ++ +PE++K +EN + K
Sbjct: 316 QFRNAHNYLKDFKDEKQVYEDSGRMIDYLHNWKCSPENSKQIENCI-----------KQL 364
Query: 430 KNDLVKVRYWSDRD 471
NDLVKV+ W ++D
Sbjct: 365 VNDLVKVKLWGEQD 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,802,809
Number of Sequences: 27780
Number of extensions: 294403
Number of successful extensions: 924
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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