Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20626
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.3  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.0  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.3  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   9.3  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 664  SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 548
            ++V+AN L V   FLL   K  L + W+  +    S+DE
Sbjct: 927  AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 584 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 676
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 339 WKFETSKYYVTIIDAPG 389
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 564 TKWIPLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLS 677
           T ++ L+HH + PD+ K+ +     +  T    AT +L+++S
Sbjct: 822 TLFMALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMS 863


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 184 HLIYKCGGID-KRTIEKFEKEAQEMVKDPSNML 279
           HL+ + G +    +IE   KEAQE+ K   N++
Sbjct: 192 HLVAQTGMVTLTNSIEAVRKEAQELKKKNVNII 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,784
Number of Sequences: 2352
Number of extensions: 16149
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)