Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20626
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 178 4e-45
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 178 4e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 178 4e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 4e-35
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 122 3e-28
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 106 2e-23
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 98 5e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 4e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 4e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 5e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 5e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 5e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.003
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.26
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.26
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.26
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.26
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.35
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 5.6
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 5.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.4
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 7.4
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 7.4
Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 178 bits (433), Expect = 4e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 434
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 435 DCAVLIVAAGTGEFEAGISKNGQTR 509
DCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTR 134
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 622
EHALLA TLGVKQL V+ T P S R + I++
Sbjct: 135 EHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 178 bits (433), Expect = 4e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 434
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 435 DCAVLIVAAGTGEFEAGISKNGQTR 509
DCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTR 134
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 104 bits (250), Expect = 5e-23
Identities = 50/64 (78%), Positives = 54/64 (84%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPIS
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPIS 194
Query: 689 GWHG 700
G++G
Sbjct: 195 GFNG 198
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 178 bits (433), Expect = 4e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 434
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 435 DCAVLIVAAGTGEFEAGISKNGQTR 509
DCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTR 134
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 104 bits (250), Expect = 5e-23
Identities = 50/64 (78%), Positives = 54/64 (84%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPIS
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPIS 194
Query: 689 GWHG 700
G++G
Sbjct: 195 GFNG 198
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 144 bits (350), Expect = 4e-35
Identities = 65/68 (95%), Positives = 68/68 (100%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 434
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 435 DCAVLIVA 458
DCAVL+VA
Sbjct: 110 DCAVLVVA 117
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +2
Query: 548 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 700
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++G
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNG 164
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 122 bits (293), Expect = 3e-28
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +3
Query: 252 NGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 431
NGK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 432 ADCAVLIVAAGTGEFEAGISKNGQTR 509
AD A+L+V A TGEFE G GQT+
Sbjct: 272 ADAAILVVNATTGEFETGFENGGQTK 297
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 118 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 246
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 209
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPI 685
EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+
Sbjct: 298 EHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPV 353
Query: 686 SGWHG 700
SG+ G
Sbjct: 354 SGFTG 358
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 122 bits (293), Expect = 3e-28
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +3
Query: 252 NGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 431
NGK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 432 ADCAVLIVAAGTGEFEAGISKNGQTR 509
AD A+L+V A TGEFE G GQT+
Sbjct: 290 ADAAILVVNATTGEFETGFENGGQTK 315
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 118 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 246
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 227
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPI 685
EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+
Sbjct: 316 EHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPV 371
Query: 686 SGWHG 700
SG+ G
Sbjct: 372 SGFTG 376
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAER 308
GKGSFKYAWVLDKLK +
Sbjct: 50 GKGSFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/99 (45%), Positives = 64/99 (64%)
Frame = +3
Query: 213 QTYHREVREGGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 392
+ Y RE +E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKE----KGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 393 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 509
+ F+ NMI G +QAD AVL+++A GEFE G + GQTR
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTR 236
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 112 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 252
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKE 150
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPI 685
EH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP
Sbjct: 237 EHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPC 296
Query: 686 SGWHG 700
SG G
Sbjct: 297 SGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 465 TGEFE 479
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 121 KTHINIVVIGHVDSGKSTTT 180
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 679
EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 151 EHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 465 TGEFE 479
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 121 KTHINIVVIGHVDSGKSTTT 180
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 679
EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 151 EHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 465 TG 470
G
Sbjct: 147 DG 148
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 115 KEKTHINIVVIGHVDSGKSTTT 180
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 465 TG 470
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 115 KEKTHINIVVIGHVDSGKSTTT 180
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 465 TG 470
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 115 KEKTHINIVVIGHVDSGKSTTT 180
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 282 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 462 GTG 470
G
Sbjct: 136 NQG 138
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 249
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 282 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 462 GTG 470
G
Sbjct: 124 SAG 126
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGI 210
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 GGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMI 416
G +GK + A ++ A GIT I + E +K VT +D PGH F
Sbjct: 163 GHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRA 222
Query: 417 TGTSQADCAVLIVAAGTG 470
G AD VL+VAA G
Sbjct: 223 RGAKGADIVVLVVAADDG 240
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 465 TG 470
G
Sbjct: 146 VG 147
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGID 213
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 455
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 455
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 204
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 321 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 470
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 288 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 452
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 453 VAAGTG 470
V A G
Sbjct: 232 VDAHEG 237
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 204
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 321 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 470
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 288 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 452
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 453 VAAGTG 470
V A G
Sbjct: 107 VDAHEG 112
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKDPSNMLGYWTN 294
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 363 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 458
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 372 IIDAPGHRDFIKNMITGTSQADCAVLIV 455
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 630 PHTSRRLATTQLLSLSCPFLD 692
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 630 PHTSRRLATTQLLSLSCPFLD 692
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 630 PHTSRRLATTQLLSLSCPFLD 692
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 630 PHTSRRLATTQLLSLSCPFLD 692
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 130 INIVVIGHVDSGKSTTT 180
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 366 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 470
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 130 INIVVIGHVDSGKSTTT 180
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 103 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 264
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 103 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 264
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 103 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 264
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 366 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 461
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 103 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 195
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 103 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 195
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical
protein T10C6.2 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 284 YPSIFEGSFTISWASF 237
YP +F+G+ TI+W SF
Sbjct: 202 YPELFDGTTTINWDSF 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,927
Number of Sequences: 27780
Number of extensions: 340584
Number of successful extensions: 1150
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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