Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20626
(702 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 160 7e-40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 160 7e-40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 160 7e-40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 160 7e-40
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 104 5e-23
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 87 1e-17
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 5e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 5e-11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 45 6e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 45 6e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 0.001
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.005
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.020
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.020
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.026
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.026
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.034
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.18
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.32
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.32
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.42
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.42
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.98
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 30 1.7
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.3
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 3.0
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.2
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.1
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.1
At4g05520.2 68417.m00839 calcium-binding EF hand family protein ... 27 9.1
At4g05520.1 68417.m00838 calcium-binding EF hand family protein ... 27 9.1
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 27 9.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +3
Query: 258 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 437
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 438 CAVLIVAAGTGEFEAGISKNGQTR 509
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPIS
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPIS 194
Query: 689 GWHG 700
G+ G
Sbjct: 195 GFEG 198
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +3
Query: 258 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 437
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 438 CAVLIVAAGTGEFEAGISKNGQTR 509
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPIS
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPIS 194
Query: 689 GWHG 700
G+ G
Sbjct: 195 GFEG 198
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +3
Query: 258 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 437
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 438 CAVLIVAAGTGEFEAGISKNGQTR 509
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPIS
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPIS 194
Query: 689 GWHG 700
G+ G
Sbjct: 195 GFEG 198
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +3
Query: 258 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 437
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 438 CAVLIVAAGTGEFEAGISKNGQTR 509
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPIS
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPIS 194
Query: 689 GWHG 700
G+ G
Sbjct: 195 GFEG 198
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 109 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 261
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 104 bits (250), Expect = 5e-23
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 434
GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 435 DCAVLIVAAGTGEFEAGISK-NGQTR 509
D A+L++ A G FEAG GQTR
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTR 367
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +1
Query: 124 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 249
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAK 279
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
EHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S
Sbjct: 368 EHARVLRGFGVEQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLS 425
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/99 (40%), Positives = 62/99 (62%)
Frame = +3
Query: 213 QTYHREVREGGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 392
Q Y +E ++ + S+ A+++D + ER +G T+++ FET TI+DAPGH
Sbjct: 134 QKYEKEAKD----KSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGH 189
Query: 393 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 509
+ ++ NMI+G SQAD VL+++A GEFE G + GQTR
Sbjct: 190 KSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTR 228
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPI 685
EH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V F+PI
Sbjct: 229 EHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPI 288
Query: 686 SGWHG 700
SG G
Sbjct: 289 SGLMG 293
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 118 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKD 264
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 465 TG 470
G
Sbjct: 177 DG 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 106 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 240
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 637
EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 185 EHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 465 TG 470
G
Sbjct: 165 DG 166
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 115 KEKTHINIVVIGHVDSGKSTTT 180
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 509 EHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 643
EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 173 EHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 465 TGEFEAGISKNGQTR 509
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGI 210
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 465 TGEFEAGISKNGQTR 509
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGI 210
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 285 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 452
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 453 VAAGTG 470
V A G
Sbjct: 183 VDASQG 188
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 231
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 465 TG 470
G
Sbjct: 109 EG 110
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCGG 207
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 464
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 465 TG 470
G
Sbjct: 196 AG 197
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 121 KTHINIVVIGHVDSGKSTTTGHLIYKCG 204
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 282 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 462 GTG 470
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 282 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 462 GTG 470
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.026
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 303 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 467
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 468 G 470
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.026
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 303 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 467
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 468 G 470
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.034
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +3
Query: 285 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 437
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 438 CAVLIVAAGTG 470
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +1
Query: 106 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-----RTIEKFEKEAQEMVKDPS 270
K EK N +I H+D GKST L+ G I K + ++K ++E VK +
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQRERGITVKAQT 118
Query: 271 NMLGY 285
+ Y
Sbjct: 119 ATMFY 123
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +3
Query: 240 GGPGNGKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNM 413
G +GK S A + A GIT + + S +T +D PGH F +
Sbjct: 226 GHVDHGKTSLLDALRNTSVAAREAGGITQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMR 285
Query: 414 ITGTSQADCAVLIVAAGTG 470
G + D VL+VAA G
Sbjct: 286 ARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 351 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 351 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 363 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 345 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 461
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.98
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 530 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 691
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 178 TGHLIYKCGGIDKRTIEKFEKEAQEMVKDP 267
T LIY +D+ I K ++E QE++KDP
Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQEIIKDP 114
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 372 IIDAPGHRDFIKNMITGTSQADCAVLIV 455
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 372 IIDAPGHRDFIKNMITGTSQADCAVLIV 455
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 372 IIDAPGHRDFIKNMITGTSQADCAVLIV 455
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 354 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 455
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 133 NIVVIGHVDSGKSTTTGHLIYKCG 204
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 366 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 455
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +3
Query: 291 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 458
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 459 AGTG 470
A G
Sbjct: 585 ADDG 588
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 593 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 682
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 575 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 575 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 688
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At4g05520.2 68417.m00839 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 151 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKDPSNMLGY 285
H+ +G + H GG + I+KFEK +M++ +MLGY
Sbjct: 489 HLPAGDFPSVEHFREVLGGYN---IDKFEKLKPKMIQAVDDMLGY 530
>At4g05520.1 68417.m00838 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 546
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 151 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKDPSNMLGY 285
H+ +G + H GG + I+KFEK +M++ +MLGY
Sbjct: 490 HLPAGDFPSVEHFREVLGGYN---IDKFEKLKPKMIQAVDDMLGY 531
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 178 TGHLIYKCGGIDKRTIEKFEKEAQEMVKDP 267
T LIY +D+ I K ++E Q++++DP
Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQDIIRDP 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,689,967
Number of Sequences: 28952
Number of extensions: 322240
Number of successful extensions: 1033
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -