Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20625
         (711 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ109556-1|AAZ99795.1|  911|Homo sapiens adaptor protein HOFI pr...    31   3.1  
AB037716-1|BAA92533.1|  550|Homo sapiens KIAA1295 protein protein.     31   3.1  

>DQ109556-1|AAZ99795.1|  911|Homo sapiens adaptor protein HOFI
           protein.
          Length = 911

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 372 NPRTVSKLCPTIRESIPSAEPQLPRSGSKSVSRATEQFPEPKSGPVQGQNQYGV 533
           N R +SK    + E  P A PQ P   S+   R  +  P PK+ P QG++Q  +
Sbjct: 611 NLRPISKSKTDLPEEKPDATPQNPFLKSRPQVRP-KPAPSPKTEPPQGEDQVDI 663


>AB037716-1|BAA92533.1|  550|Homo sapiens KIAA1295 protein protein.
          Length = 550

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 372 NPRTVSKLCPTIRESIPSAEPQLPRSGSKSVSRATEQFPEPKSGPVQGQNQYGV 533
           N R +SK    + E  P A PQ P   S+   R  +  P PK+ P QG++Q  +
Sbjct: 250 NLRPISKSKTDLPEEKPDATPQNPFLKSRPQVRP-KPAPSPKTEPPQGEDQVDI 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,489,584
Number of Sequences: 237096
Number of extensions: 2038563
Number of successful extensions: 8305
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8299
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)