Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20625
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p pro...    30   2.7  
AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,...    30   2.7  
AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,...    30   2.7  
AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,...    30   2.7  

>AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p
           protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 153 KPIKLNRKRKCKEISSTQHGLHPPTKPTRVSR 248
           KP  L  KR+ K  S+    LHP T PTR +R
Sbjct: 483 KPANLAPKRQNKSASAIYARLHPSTPPTRPAR 514


>AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,
           isoform C protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 153 KPIKLNRKRKCKEISSTQHGLHPPTKPTRVSR 248
           KP  L  KR+ K  S+    LHP T PTR +R
Sbjct: 483 KPANLAPKRQNKSASAIYARLHPSTPPTRPAR 514


>AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,
           isoform B protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 153 KPIKLNRKRKCKEISSTQHGLHPPTKPTRVSR 248
           KP  L  KR+ K  S+    LHP T PTR +R
Sbjct: 483 KPANLAPKRQNKSASAIYARLHPSTPPTRPAR 514


>AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,
           isoform A protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 153 KPIKLNRKRKCKEISSTQHGLHPPTKPTRVSR 248
           KP  L  KR+ K  S+    LHP T PTR +R
Sbjct: 483 KPANLAPKRQNKSASAIYARLHPSTPPTRPAR 514


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,009,015
Number of Sequences: 53049
Number of extensions: 579748
Number of successful extensions: 1941
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)