Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20625
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical...    29   4.3  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
            F20C5.2b protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 135  TKTSQRKPIKLNR--KRKCKEISSTQHGLHPPTKPTRVSRN 251
            T  ++RK I + R   R  K+   +   LHPPT P+++S++
Sbjct: 1050 TPRTRRKLISVRRLKDRNRKKFKCSMKRLHPPTSPSKISKS 1090


>Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical
           protein F33H2.7 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -3

Query: 511 CTGPDFGSGNCSVALETDFEPDRGSCGSALGIDSLI 404
           CTG   GSGNCSV  +  F P   S  S L +  +I
Sbjct: 264 CTGFVKGSGNCSVCEKLAFLPFEQSIHSTLNLLDII 299


>AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical
           protein Y54E2A.11a protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 127 DHVNDPTDYFFRNVENLSWFQQRCRCVD*YD*KYDKRGLHAV 2
           DH   P    + +V +L W+ Q  RC D +   +DK G+  V
Sbjct: 139 DHWTTPEKQAYNDVGDLWWWLQNERCRDQFAISHDKLGVPTV 180


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 387 SKLCPTIRESIPSAEPQLPRSGSKSVSRATEQFPEPKSGP 506
           S   P+     PS++   P +GS + S+ + Q P P   P
Sbjct: 380 SSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP 419


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 387 SKLCPTIRESIPSAEPQLPRSGSKSVSRATEQFPEPKSGP 506
           S   P+     PS++   P +GS + S+ + Q P P   P
Sbjct: 587 SSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP 626


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 387 SKLCPTIRESIPSAEPQLPRSGSKSVSRATEQFPEPKSGP 506
           S   P+     PS++   P +GS + S+ + Q P P   P
Sbjct: 587 SSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP 626


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,629,345
Number of Sequences: 27780
Number of extensions: 284568
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)