Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20624
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.060
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   6.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.060
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 122 CPDKYYVSNA-FKGTDKCDRSSSYCVPILGRGYEAGGYKCECLQG 253
           CP+ +Y  N  F G D CD +      +  R  + GGY C+C  G
Sbjct: 364 CPEGFYGKNCEFSGYD-CDSNPCQNGGVC-RISDGGGYICDCPSG 406


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 85  GDDVIAVSGHQPVPGQVLRV 144
           G+D++  SGH+   G ++ +
Sbjct: 69  GEDIVTYSGHKLKAGSMVHL 88


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 85  GDDVIAVSGHQPVPGQVLRV 144
           G+D++  SGH+   G ++ +
Sbjct: 386 GEDLVTHSGHKLAKGSIVNL 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,337
Number of Sequences: 336
Number of extensions: 1379
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)