Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20624
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical prote...    23   3.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.4  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    22   8.5  

>AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical protein
           17 protein.
          Length = 91

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 97  IAVSGHQPVPGQVLRVQRIQGN 162
           IA +G  P+PGQ  R    +GN
Sbjct: 38  IAPTGADPLPGQTQRTLGYRGN 59


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 176  CRIYPFP*MRWTRSTC 129
            C I+PFP   W  + C
Sbjct: 1134 CTIHPFPASLWRAAVC 1149


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -2

Query: 135 YLSGHWLMSRDSND-IVTATAPLNSSLTL 52
           +L   WL  RD ND +V   A   +S+ L
Sbjct: 33  FLPDRWLEQRDENDNVVNKRAEPGASVVL 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,115
Number of Sequences: 2352
Number of extensions: 6226
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)