Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20623
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 463 PHPRLQRSPCRLLRNPSRGQPGP 395
           PHP L   P  L  +P+   PGP
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 463 PHPRLQRSPCRLLRNPSRGQPGP 395
           PHP L   P  L  +P+   PGP
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGP 146


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 531 FTGM*NGAVRHKRYFIGLVLFGSLTLAFSGVHADFFVILL 412
           F  + NG V +  +   +    +L   F G   D F+ILL
Sbjct: 506 FPHLFNGLVDYSLWKALIFQISNLQTTFGGTFGDTFIILL 545


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 288 AAQNSNERGRSRGQACFR 341
           A +   +RG S+G +C+R
Sbjct: 300 ALRQMYDRGESKGSSCYR 317



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/52 (23%), Positives = 21/52 (40%)
 Frame = -1

Query: 508 SAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 353
           ++P K ++ L T     P        +  +  R +  P     +  PPYP+R
Sbjct: 440 NSPTKPYYKLKTANNKRPPSTELGTNIYTSSKRQRTSPQLSPMSSLPPYPNR 491


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 352 RTSARKHAWPLD 317
           R  A KH WP D
Sbjct: 201 RVDAAKHMWPAD 212


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 352 RTSARKHAWPLD 317
           R  A KH WP D
Sbjct: 202 RVDAAKHMWPAD 213


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 352 RTSARKHAWPLD 317
           R  A KH WP D
Sbjct: 202 RVDAAKHMWPAD 213


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 380 SPKPVRTWLPSRRITKKSAWTPLKA 454
           S K V+ W  +RR+  K    P  A
Sbjct: 157 SEKQVKIWFQNRRVKYKKEDLPAAA 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,023
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)