Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20623
(562 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31) 125 2e-29
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 87 9e-18
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 9e-18
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 9e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 3e-15
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 45 4e-05
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 45 4e-05
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 45 4e-05
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 44 6e-05
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 44 6e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 40 0.001
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.091
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 32 0.37
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 32 0.37
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_40787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_3085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099) 29 3.4
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 4.5
SB_25200| Best HMM Match : RVT_1 (HMM E-Value=1.7) 28 4.5
SB_47701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 28 6.0
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 7.9
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31)
Length = 108
Score = 125 bits (302), Expect = 2e-29
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = -2
Query: 210 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 31
+ESINSRLALVMKSGK+ LG K TLKTLRQGKAKLVIIA N P LRKSEIEYYA+LAKTG
Sbjct: 1 MESINSRLALVMKSGKFTLGLKSTLKTLRQGKAKLVIIANNTPQLRKSEIEYYAMLAKTG 60
Query: 30 VHHYSGNNIE 1
VHHY+GNNIE
Sbjct: 61 VHHYTGNNIE 70
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 14 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 384 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 423
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 98 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 137
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 337 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 376
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 1180 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1219
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 771 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 365 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 404
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 833 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 872
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 985 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1024
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 198 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 237
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 313 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 352
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 552 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 591
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV ++S
Sbjct: 816 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAVES 855
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 385 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 198 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 336 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 369
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 156 RKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 218 RKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
+RAF+HWY EGM+ +F EA D+ L Y++
Sbjct: 296 RRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 33.9 bits (74), Expect = 0.091
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEARED 399
+RAF+HWY EGM+ EF+E + +
Sbjct: 210 RRAFLHWYTTEGMDPLEFTEIKRN 233
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = -1
Query: 427 LRNPSRGQPGPHGLRRT--LPPP-YPHRRTSARKHAWPLDRPLSFEF*AAS 284
+RN S G PG + L+ + +PPP YP R +S + +P + PLS AA+
Sbjct: 502 MRNLSEGFPGGNPLQGSGPVPPPAYPTRPSSNPPNTFPAESPLSHSGAAAA 552
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = -1
Query: 427 LRNPSRGQPGPHGLRRT--LPPP-YPHRRTSARKHAWPLDRPLSFEF*AAS 284
+RN S G PG + L+ + +PPP YP R +S + +P + PLS AA+
Sbjct: 126 MRNLSEGFPGGNPLQGSGPVPPPAYPTRPSSNPPNTFPAESPLSHSGAAAA 176
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = -1
Query: 457 PRLQRSPCRLLRNPSRGQPGPHGLR---RTLPPPYPHRRTSARKHAWPLDRPL 308
PR QR +P+ P L R+ PPPYP RTS H P+
Sbjct: 737 PRQQRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSGNPHMGSSPAPI 789
>SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 420 ILLEGSQVLTGFGELSLLHTLTDVPVHE----STLGL*IDLFHLSFEPLLFHLCSWIH 259
+L+ Q ++ E SL TL P+ + LG+ D HL++EP + HLC I+
Sbjct: 607 MLIGSHQKISNLAESSLSVTLNSCPIEQVNSARVLGVVFDN-HLTWEPHVEHLCKKIN 663
>SB_40787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 420 ILLEGSQVLTGFGELSLLHTLTDVPVHE----STLGL*IDLFHLSFEPLLFHLCSWIH 259
+L+ Q ++ E SL TL P+ + LG+ D HL++EP + HLC I+
Sbjct: 48 MLIGSHQKISNLAESSLSVTLNSCPIEQVNSARVLGVVFDN-HLTWEPHVEHLCKKIN 104
>SB_3085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 420 ILLEGSQVLTGFGELSLLHTLTDVPVHE----STLGL*IDLFHLSFEPLLFHLCSWIH 259
+L+ Q ++ E SL TL P+ + LG+ D HL++EP + HLC I+
Sbjct: 48 MLIGSHQKISNLAESSLSVTLNSCPIEQVNSARVLGVVFDN-HLTWEPHVEHLCKKIN 104
>SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 420 ILLEGSQVLTGFGELSLLHTLTDVPVHE----STLGL*IDLFHLSFEPLLFHLCSWIH 259
+L+ Q ++ E SL TL P+ + LG+ D HL++EP + HLC I+
Sbjct: 48 MLIGSHQKISNLAESSLSVTLNSCPIEQVNSARVLGVVFDN-HLTWEPHVEHLCKKIN 104
>SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 420 ILLEGSQVLTGFGELSLLHTLTDVPVHE----STLGL*IDLFHLSFEPLLFHLCSWIH 259
+L+ Q ++ E SL TL P+ + LG+ D HL++EP + HLC I+
Sbjct: 149 MLIGSHQKISNLAESSLSVTLNSCPIEQVNSARVLGVVFDN-HLTWEPHVEHLCKKIN 205
>SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099)
Length = 437
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 280 EKKRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
+K+ K+ RAFV ++ EG EE D A +E+D EE
Sbjct: 53 DKRMATVASKKKTRAGHRAFVTRFMAEGCEEKTLEMMSRDDAFIEEDVEE 102
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 496 KIFHWLSTLRLPHP-RLQRSPCRLLRNPSRGQPGPH 392
K+FH + L P RL+R +++R + G P PH
Sbjct: 154 KLFHAVVVLEFPKSQRLERGQSQVIRCSAEGYPTPH 189
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 418 PSRGQPGPHGLRRTLPPPYPHRRTSA 341
PSRG P P R + PPP P R +A
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTA 325
>SB_25200| Best HMM Match : RVT_1 (HMM E-Value=1.7)
Length = 371
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 422 TKKSAWTPLKARVREPKSTKPMKYLLWRTAPFYIP 526
+ K + PLK ++ +P S + ++L +R+AP Y P
Sbjct: 214 SSKKHFKPLKKKLSKP-SAREWRFLTYRSAPAYAP 247
>SB_47701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 108 LVIIAKNAPPLRKSEIEYYALLAKTGVHH 22
L++ A N PP + SE Y+ALL H+
Sbjct: 270 LILTAPNVPPQKGSENLYFALLTYRNPHY 298
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +1
Query: 295 KTQMKEVDLEAKRAFVHWYVGEGMEEGEF--------SEAREDLAALE 414
KT++K L A++AF W V G E G + RED+A +E
Sbjct: 312 KTEVKRAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRREDIAKVE 359
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 374 ESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMK 490
+ SPKP + WL +++ KK+ P K +V++ K KP++
Sbjct: 1630 KDSPKPQKVWLKNKKKGKKA--KPNKQQVKK-KPAKPVQ 1665
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 460 HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWPL 320
+PR P P P P T PP YP R++ A + PL
Sbjct: 89 NPRPHTPPSCQSNTPRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPL 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,458,398
Number of Sequences: 59808
Number of extensions: 337146
Number of successful extensions: 1181
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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