Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20623
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical ... 129 2e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 87 8e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 87 8e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 87 8e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 87 8e-18
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 86 1e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 86 1e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 86 1e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 85 3e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 85 3e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 85 3e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 85 3e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 85 3e-17
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 85 3e-17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 83 1e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 74 6e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 45 3e-05
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 45 3e-05
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 45 3e-05
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.19
L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.43
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.43
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 0.57
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 30 1.3
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 29 1.7
U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical p... 29 2.3
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.3
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 3.0
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 4.0
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 4.0
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 4.0
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 4.0
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 4.0
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.3
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 28 5.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 7.0
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 27 7.0
Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical
protein Y106G6H.3 protein.
Length = 113
Score = 129 bits (311), Expect = 2e-30
Identities = 60/80 (75%), Positives = 69/80 (86%)
Frame = -2
Query: 240 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 61
M A K +K E+INSRL++VMK+G+Y LGYKQTLK+L GKAKLVIIA N PPLRKSEI
Sbjct: 1 MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60
Query: 60 EYYALLAKTGVHHYSGNNIE 1
EYYA+LAKTGVHHY+GNNIE
Sbjct: 61 EYYAMLAKTGVHHYNGNNIE 80
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 399 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 86.2 bits (204), Expect = 1e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 395 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 434
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D+
Sbjct: 405 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 35 AKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 74
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 441
AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 406 AKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 444
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 441
AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 378 AKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 416
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 74.1 bits (174), Expect = 6e-14
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 444
+KRAFVHW+VGEGMEEGEF EAR+DLAALEKDY EV D+
Sbjct: 403 SKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 44.8 bits (101), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 44.8 bits (101), Expect = 4e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 328 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Frame = +1
Query: 232 CNHFGSVKLMNPRA----QMEKKR----LKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSE 387
C VK++ RA ME +R + ++M+EV + K V+W GM+ +FS+
Sbjct: 548 CGEASRVKVIGNRACAYITMENRRSANDVVSKMREVSVAKKMVKVYWARSPGMDSDQFSD 607
Query: 388 ARE-DLAALEKDYEEVGMD 441
+ + LE YE++ +D
Sbjct: 608 LWDSNRGVLEIPYEKLPLD 626
>L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical
protein ZK686.1 protein.
Length = 44
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -2
Query: 183 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 88
+VMK+G+Y L Y+Q LK+L AKLVI K+
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 286 KRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 432
KR+ Q L ++AF+HWY MEE EF++A DL + + YE+V
Sbjct: 377 KRISKQF--AGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 286 KRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 432
KR+ Q L ++AF+HWY MEE EF++A DL + + YE+V
Sbjct: 377 KRISKQF--AGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -1
Query: 478 STLRLPHPRLQRSPCRLLRNP--SRGQPGPHGLR-RTLPPPYPHRRTSARKHAWPLDR 314
S R P P+ + P R R+P S+ P P + R+ PP P RR S + P R
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPR 452
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 213 SFSVSLLQPFWERKANESKSTNGKEAAQNSNE 308
+FS+ + Q WER+ + KS N + +NS E
Sbjct: 55 AFSLPIAQIVWERRKSAEKSQNSGQKPENSRE 86
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 457 PRLQRSPCRLLRNPSRGQPG-PHGLRRTLPPPYP--HRRTSARKHAWPLDRPLSFEF*AA 287
P L P R P++ P P L+ T P P+P H A +W LD PL+ +
Sbjct: 395 PPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPHPNSHDPMMAPSRSWWLDSPLTA---SV 451
Query: 286 SFPFVLLDSLALRSQNG 236
P + L L +Q G
Sbjct: 452 QSPLSVATPLPLANQTG 468
>U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical
protein C35D10.17 protein.
Length = 102
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 329 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVRE 466
+V CT R+WRR+++P R + R + +K WTP +++E
Sbjct: 43 AVWQCTKKE-RIWRRDNNPAYKRRIVELRSLPEK-YWTPALHKLKE 86
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Frame = -1
Query: 475 TLRLPHP----RLQRSPCRLLRNPSRGQ------PGPHGLRRTL-PPPYPHRRTSARKHA 329
T R P P R+ RSP R R+P R Q P P +R+ PPP RR +R +
Sbjct: 111 TRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKS 170
Query: 328 WP 323
P
Sbjct: 171 PP 172
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 492 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 385
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 301 QMKEVDLEAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 432
++KE+ E R+ HW V + M EGE E + + LE + +++
Sbjct: 889 KIKEISAEKDRS--HWEVEKEMLEGEAKELTDRIEGLEAEVKKL 930
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 301 QMKEVDLEAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 432
++KE+ E R+ HW V + M EGE E + + LE + +++
Sbjct: 889 KIKEISAEKDRS--HWEVEKEMLEGEAKELTDRIEGLEAEVKKL 930
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 286 KRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
K + + + V E + + H V E + ++ ++RED A KDYE+
Sbjct: 427 KLREERFRAVQTEMQYLYAHRCVLEYLALKKYVQSREDFAKFAKDYEQ 474
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 457 PRLQRSPCRLLRNPSRGQPG-PHGLRRTLPPPYP--HRRTSARKHAWPLDRPLSFEF*AA 287
P L P R P++ P P L+ T P P P H A +W LD PL+ +
Sbjct: 491 PPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWWLDSPLTA---SV 547
Query: 286 SFPFVLLDSLALRSQNG 236
P + L L +Q G
Sbjct: 548 QSPLSVATPLPLANQTG 564
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 457 PRLQRSPCRLLRNPSRGQPG-PHGLRRTLPPPYP--HRRTSARKHAWPLDRPLSFEF*AA 287
P L P R P++ P P L+ T P P P H A +W LD PL+ +
Sbjct: 491 PPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWWLDSPLTA---SV 547
Query: 286 SFPFVLLDSLALRSQNG 236
P + L L +Q G
Sbjct: 548 QSPLSVATPLPLANQTG 564
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 457 PRLQRSPCRLLRNPSRGQPG-PHGLRRTLPPPYP--HRRTSARKHAWPLDRPLSFEF*AA 287
P L P R P++ P P L+ T P P P H A +W LD PL+ +
Sbjct: 491 PPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWWLDSPLTA---SV 547
Query: 286 SFPFVLLDSLALRSQNG 236
P + L L +Q G
Sbjct: 548 QSPLSVATPLPLANQTG 564
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1
Query: 478 STLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYP 359
ST+ L P SPC PS P P+G RR+LPP P
Sbjct: 44 STMLLS-PNFSPSPCPRRSLPST--PLPNGHRRSLPPTPP 80
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 253 KLMNPRAQMEKKRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDY 423
KL++ MEK L M +++LEA + + E F+E R E+L LE +
Sbjct: 239 KLLDLNKIMEKIHLNGDMSDIELEASKMKEQADEMRSLAEEVFNERRAKEEELQGLEIEV 298
Query: 424 EE 429
EE
Sbjct: 299 EE 300
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 371 RESSPKPVRTWLPSRR---ITKKSAWTPLKARVREPKSTKP 484
R+ SPK V P ++ + KK P ++ +EP+ +KP
Sbjct: 573 RDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEKSKP 613
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 421 NPSRGQPGPHGLRRTLPPPYPHRRTSA 341
N R QP P R PPP PHR+ ++
Sbjct: 14 NRFRKQPPPPPSPRRAPPPPPHRKPAS 40
>Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical
protein H12I19.2 protein.
Length = 324
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 452 ARVREPKSTKPMKYLLWRTAPFYI 523
A V K +KP KY+LW+T +I
Sbjct: 219 AIVLSAKQSKPQKYILWQTMIVFI 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,247,411
Number of Sequences: 27780
Number of extensions: 251531
Number of successful extensions: 969
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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