Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20622
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 587 PHPRLQRSPCRLLRNPSRGQPGP 519
           PHP L   P  L  +P+   PGP
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 587 PHPRLQRSPCRLLRNPSRGQPGP 519
           PHP L   P  L  +P+   PGP
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGP 146


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 413 AAQNSNERGRSRGQACFRAL 472
           A +   +RG S+G +C+R L
Sbjct: 300 ALRQMYDRGESKGSSCYRLL 319


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 214 FLAMITSFALPCRRFSKFACILSNI 288
           FLAM+TS  +  +R +    +LSN+
Sbjct: 118 FLAMLTSMVMFYKRSNDLKTLLSNL 142


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 214 FLAMITSFALPCRRFSKFACILSNI 288
           FLAM+TS  +  +R +    +LSN+
Sbjct: 74  FLAMLTSMVMFYKRSNDLKTLLSNL 98


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 655 SPECKTVRVRHKRYF--IGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGFENSPSSIPS 482
           +P+   ++V++ +     G++++   T  F+G+    + IL   +  L   E  P  +P+
Sbjct: 339 NPKSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQILNAINAALKSDEIPPEPVPT 398

Query: 481 PTYQCTK 461
           P  Q T+
Sbjct: 399 PEPQPTQ 405


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 84  RHHRPW*LGHYHHF 43
           RHH     GH HHF
Sbjct: 117 RHHEEVADGHQHHF 130


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 84  RHHRPW*LGHYHHF 43
           RHH     GH HHF
Sbjct: 117 RHHEEVADGHQHHF 130


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 84  RHHRPW*LGHYHHF 43
           RHH     GH HHF
Sbjct: 117 RHHEEVADGHQHHF 130


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 477 RTSARKHAWPLD 442
           R  A KH WP D
Sbjct: 201 RVDAAKHMWPAD 212


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 477 RTSARKHAWPLD 442
           R  A KH WP D
Sbjct: 202 RVDAAKHMWPAD 213


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 477 RTSARKHAWPLD 442
           R  A KH WP D
Sbjct: 202 RVDAAKHMWPAD 213


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/69 (18%), Positives = 28/69 (40%)
 Frame = -3

Query: 421 LSRFFSICALGFISIYAPKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTFDKA 242
           + +F+++     +SI     + +K   +    I   L    ++  YC  Y   + T    
Sbjct: 31  IQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYK 90

Query: 241 KQSWLSSLK 215
           +++W   LK
Sbjct: 91  RRTWTRLLK 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,055
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)