Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20622
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31) 139 2e-33
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 3e-06
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 49 3e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 3e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 49 3e-06
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 49 3e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 3e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 3e-06
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 49 3e-06
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 49 3e-06
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.023
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 36 0.023
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.023
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.023
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 36 0.023
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 31 0.66
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 0.87
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.2
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 28 6.2
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 28 6.2
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 28 6.2
SB_47701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 28 8.1
>SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31)
Length = 108
Score = 139 bits (337), Expect = 2e-33
Identities = 63/85 (74%), Positives = 73/85 (85%)
Frame = -2
Query: 293 GKILLRIQANFENLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 114
GK L +++ + LRQGKAKLVIIA N P LRKSEIEYYA+LAKTGVHHY+GNNIELGTA
Sbjct: 15 GKFTLGLKSTLKTLRQGKAKLVIIANNTPQLRKSEIEYYAMLAKTGVHHYTGNNIELGTA 74
Query: 113 CGKYYRVCTLAITDPGDSDIITTLP 39
CGKY+RV L+ITDPGDSDII ++P
Sbjct: 75 CGKYFRVSVLSITDPGDSDIIRSMP 99
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3
Query: 334 IESINSRLALVMKSGKYCLGYKQTLKTFDKAK 239
+ESINSRLALVMKSGK+ LG K TLKT + K
Sbjct: 1 MESINSRLALVMKSGKFTLGLKSTLKTLRQGK 32
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 14 AKRAFVHWYVGEGMEEGEFSE 34
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 34 EAREDLAALEKDYEEVGVDS 53
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 198 AKRAFVHWYVGEGMEEGEFSE 218
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEE 553
EAREDLAALEKDYEE
Sbjct: 218 EAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 384 AKRAFVHWYVGEGMEEGEFSE 404
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 404 EAREDLAALEKDYEEVGVDS 423
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 98 AKRAFVHWYVGEGMEEGEFSE 118
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 118 EAREDLAALEKDYEEVGVDS 137
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 552 AKRAFVHWYVGEGMEEGEFSE 572
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 572 EAREDLAALEKDYEEVGADS 591
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 337 AKRAFVHWYVGEGMEEGEFSE 357
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 357 EAREDLAALEKDYEEVGVDS 376
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 771 AKRAFVHWYVGEGMEEGEFSE 791
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 1180 AKRAFVHWYVGEGMEEGEFSE 1200
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 1200 EAREDLAALEKDYEEVGVDS 1219
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEE 553
EAREDLAALEKDYEE
Sbjct: 791 EAREDLAALEKDYEE 805
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 420 EAREDLAALEKDYEEVGVDS 439
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 385 AKRAFVHWYVGEGMEEGEFSE 405
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 816 AKRAFVHWYVGEGMEEGEFSE 836
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEV ++S
Sbjct: 836 EAREDLAALEKDYEEVAVES 855
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEE 553
EAREDLAALEKDYEE
Sbjct: 405 EAREDLAALEKDYEE 419
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 365 AKRAFVHWYVGEGMEEGEFSE 385
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 385 EAREDLAALEKDYEEVGVDS 404
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 833 AKRAFVHWYVGEGMEEGEFSE 853
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 853 EAREDLAALEKDYEEVGVDS 872
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEE 553
EAREDLAALEKDYEE
Sbjct: 420 EAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 985 AKRAFVHWYVGEGMEEGEFSE 1005
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 1005 EAREDLAALEKDYEEVGVDS 1024
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 325 AKRAFVHWYVGEGMEEGEFSE 345
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 345 EAREDLAALEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 198 AKRAFVHWYVGEGMEEGEFSE 218
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 218 EAREDLAALEKDYEEVGVDS 237
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 313 AKRAFVHWYVGEGMEEGEFSE 333
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 333 EAREDLAALEKDYEEVGVDS 352
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 420 EAREDLAALEKDYEEVGVDS 439
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 156 RKAFLHWYTGEGMDEMEFTE 175
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 336 RKAFLHWYTGEGMDEMEFTE 355
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 218 RKAFLHWYTGEGMDEMEFTE 237
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
+RAF+HWY EGM+ EF++
Sbjct: 210 RRAFLHWYTTEGMDPLEFTE 229
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 31.1 bits (67), Expect = 0.87
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
+RAF+HWY EGM+ +F +
Sbjct: 296 RRAFLHWYTEEGMDSQQFEE 315
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 390 PRAQMEKKRLKTQMKEVDLEAKRAFVHWYVGEGMEEGEFSKPVRTWLPSRRITKKSAWTP 569
P+A KK L + E+K+ VHW G+EE V TW + KS P
Sbjct: 518 PKAHKAKKTLDKK------ESKKETVHWSPKTGVEEKNTLPVVPTWKSPVKKPTKSTVKP 571
Query: 570 L----KARVREPKSTK 605
L K + P +TK
Sbjct: 572 LPKLAKTTFKPPSTTK 587
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 91 AHSPSQTLVTRTLSPLC 41
AHSP+ TL+T TL+P C
Sbjct: 152 AHSPATTLITVTLTPNC 168
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -2
Query: 578 RLQRSPCRLLRNPSRGQPGPHGLRELSLLHTLTDVPVHESTLGL*IDLFHLSFEPLLFHL 399
RL PCRL+ PSR P R S+L L+ VP S + L + + L
Sbjct: 457 RLSSVPCRLISLPSRFSSVPS--RSSSVLCRLSSVPYRLSLVTLRLSSVPSRLNSIPSRL 514
Query: 398 CS 393
CS
Sbjct: 515 CS 516
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 620 KIFHWLSTLRLPHP-RLQRSPCRLLRNPSRGQPGPH 516
K+FH + L P RL+R +++R + G P PH
Sbjct: 154 KLFHAVVVLEFPKSQRLERGQSQVIRCSAEGYPTPH 189
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 498 PPPYPHRRTSARKHAWPLDRPLSFEF*AASFPFVLLDSLAFTLP 367
PP YP R +S + +P + PLS AA+ L + + T P
Sbjct: 523 PPAYPTRPSSNPPNTFPAESPLSHSGAAAAAAAALAAASSMTYP 566
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 498 PPPYPHRRTSARKHAWPLDRPLSFEF*AASFPFVLLDSLAFTLP 367
PP YP R +S + +P + PLS AA+ L + + T P
Sbjct: 147 PPAYPTRPSSNPPNTFPAESPLSHSGAAAAAAAALAAASSMTYP 190
>SB_47701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 233 LVIIAKNAPPLRKSEIEYYALLAKTGVHH 147
L++ A N PP + SE Y+ALL H+
Sbjct: 270 LILTAPNVPPQKGSENLYFALLTYRNPHY 298
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -3
Query: 535 EGSQVLTGFENSPSSI-PSPTYQCTKARLASRSTSFI*VLSRFFSICALGFIS--IYAPK 365
+ ++++ + P+ + PS C + LAS+ ++ ++IC L S ++A K
Sbjct: 630 QSARIIYAGSSVPTRLRPSKQPLCNRHHLASKQEEKTHIMKCIYTICTLALASSLVFADK 689
Query: 364 MVAAKKQKKTIESI 323
K+Q++ + ++
Sbjct: 690 KEERKEQREKVGTV 703
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,805,098
Number of Sequences: 59808
Number of extensions: 428502
Number of successful extensions: 1174
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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