Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20622
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   3.0  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.0  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.0  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.0  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 560 CRLLRNPSRGQPGPHGLRELSLLHTLTDVPVHESTLG 450
           C++ R+P     G      L ++H+    P+ E+TLG
Sbjct: 320 CKMARSPFPPVAGKTSTEVLDIIHSDVCGPMEETTLG 356


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = -3

Query: 403 ICALGFISIYAPKMVAAKKQKKTIESI 323
           +  + FIS+YAP  ++ ++ ++ +E++
Sbjct: 82  VAGIDFISVYAPPSLSPQEYERLLEAV 108


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 495 PPYPHRRTSARKHAWPLDRPLS 430
           PP   R  S R  +WP  RP S
Sbjct: 274 PPARRRSRSTRPTSWPRSRPTS 295


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 234 LCFALSKVFKVCLY 275
           LC+AL++VF  C++
Sbjct: 390 LCYALAQVFLFCIF 403


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 234 LCFALSKVFKVCLY 275
           LC+AL++VF  C++
Sbjct: 243 LCYALAQVFLFCIF 256


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 234 LCFALSKVFKVCLY 275
           LC+AL++VF  C++
Sbjct: 390 LCYALAQVFLFCIF 403


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -3

Query: 403 ICALGFISIYAPKMVAAKKQKKTIESINSRLA 308
           +  + FIS+YAP  ++A + ++ + +I    A
Sbjct: 145 VAGITFISVYAPPSLSAHEFERLLGAIELEAA 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,956
Number of Sequences: 2352
Number of extensions: 13186
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)