Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20622
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical ... 136 1e-32
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 49 3e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 49 3e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 49 3e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 49 3e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 49 3e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 49 3e-06
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 48 6e-06
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 48 6e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 48 6e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 48 6e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 48 6e-06
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 36 0.021
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 36 0.021
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 36 0.021
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 36 0.021
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 30 1.8
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 30 1.8
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 30 1.8
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 30 1.8
Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 29 4.1
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 4.1
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.2
Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical
protein Y106G6H.3 protein.
Length = 113
Score = 136 bits (330), Expect = 1e-32
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2
Query: 293 GKILLRIQANFENLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 114
G+ +L + ++L GKAKLVIIA N PPLRKSEIEYYA+LAKTGVHHY+GNNIELGTA
Sbjct: 25 GQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEIEYYAMLAKTGVHHYNGNNIELGTA 84
Query: 113 CGKYYRVCTLAITDPGDSDIITTLPEASA 27
CG+ +RVCTLA+TD GDSDII ++P SA
Sbjct: 85 CGRLFRVCTLAVTDAGDSDIILSVPSESA 113
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -3
Query: 364 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTFDKAK 239
M A K +K E+INSRL++VMK+G+Y LGYKQTLK+ K
Sbjct: 1 MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGK 42
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 406 AKRAFVHWYVGEGMEEGEFSE 426
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMD 565
EARED+AALEKDYEE+G D
Sbjct: 426 EAREDMAALEKDYEEIGED 444
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 395 AKRAFVHWYVGEGMEEGEFSE 415
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 415 EAREDLAALEKDYEEVGADS 434
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EARED+AALEKDYEEVG+DS
Sbjct: 420 EAREDMAALEKDYEEVGVDS 439
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 420 EAREDLAALEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 405 AKRAFVHWYVGEGMEEGEFSE 425
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+D+
Sbjct: 425 EAREDLAALEKDYEEVGLDA 444
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 399 AKRAFVHWYVGEGMEEGEFSE 419
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 419 EAREDLAALEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 420 EAREDLAALEKDYEEVGVDS 439
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 378 AKRAFVHWYVGEGMEEGEFSE 398
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMD 565
EARED+AALEKDYEE+G D
Sbjct: 398 EAREDMAALEKDYEEIGED 416
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEFS+
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSE 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG+DS
Sbjct: 420 EAREDLAALEKDYEEVGVDS 439
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 398 AKRAFVHWYVGEGMEEGEFTE 418
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 418 EAREDLAALEKDYEEVGADS 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEFSK 512
AKRAFVHWYVGEGMEEGEF++
Sbjct: 35 AKRAFVHWYVGEGMEEGEFTE 55
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 509 EAREDLAALEKDYEEVGMDS 568
EAREDLAALEKDYEEVG DS
Sbjct: 55 EAREDLAALEKDYEEVGADS 74
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3
Query: 450 AKRAFVHWYVGEGMEEGEF 506
+KRAFVHW+VGEGMEEGEF
Sbjct: 403 SKRAFVHWFVGEGMEEGEF 421
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 506 LEAREDLAALEKDYEEVGMDS 568
+EAR+DLAALEKDY EV D+
Sbjct: 422 MEARDDLAALEKDYAEVSRDT 442
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 453 KRAFVHWYVGEGMEEGEFSK 512
++AF+HWY GEGM+E EF++
Sbjct: 391 RKAFLHWYTGEGMDEMEFTE 410
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 391 GFISIYAPKMVAAKKQKKTIESINSRLALV 302
GF +I P V AKK ++E+IN+R L+
Sbjct: 138 GFATIVGPNTVQAKKNDGSVETINARNILI 167
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 362 HFGSVNANESKSTNGKEAAQNSNERGRSRGQACFR 466
H S+ + + S +GK A ++N R R+RG A +
Sbjct: 777 HLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLK 811
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 362 HFGSVNANESKSTNGKEAAQNSNERGRSRGQACFR 466
H S+ + + S +GK A ++N R R+RG A +
Sbjct: 755 HLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLK 789
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 362 HFGSVNANESKSTNGKEAAQNSNERGRSRGQACFR 466
H S+ + + S +GK A ++N R R+RG A +
Sbjct: 777 HLASLTRSNTSSKHGKSGALSTNSRSRTRGLASLK 811
>Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical
protein T06H11.4 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = -2
Query: 305 GDEIGKILLRIQANFENLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH-------H 147
G +I +I+ IQ ++ L + A+ V +++ PP+ S + YA++A G+
Sbjct: 27 GAQIPRIVESIQVDWSALGRVVAEEVKSSEDMPPVAASTKDGYAVIAHDGIGLKKMVGVS 86
Query: 146 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 51
+GN + GK R+ T I G +I
Sbjct: 87 LAGNIYQGAVEIGKCVRISTGGIIPEGADAVI 118
>Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical
protein T06H11.4 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = -2
Query: 305 GDEIGKILLRIQANFENLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH-------H 147
G +I +I+ IQ ++ L + A+ V +++ PP+ S + YA++A G+
Sbjct: 27 GAQIPRIVESIQVDWSALGRVVAEEVKSSEDMPPVAASTKDGYAVIAHDGIGLKKMVGVS 86
Query: 146 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 51
+GN + GK R+ T I G +I
Sbjct: 87 LAGNIYQGAVEIGKCVRISTGGIIPEGADAVI 118
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 247 CRRFSKFACILSNIFPISSPKQGGS 321
CR F ++AC + FP++ PK S
Sbjct: 341 CREFPRYACEFTERFPVTLPKSTSS 365
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 616 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 509
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 521 PHGLREL-SLLHTLTDVPVHESTLGL*IDLFHLSFEPLLFHLCSWIH*HLRSQNGCSKET 345
P+ LR+L H L D+ V L IDLFH E LC + +L+SQ G K
Sbjct: 380 PNVLRKLYDRSHVLQDMLVPLDKLEECIDLFHKEVEIYPMWLCPF---YLKSQPGLMKLR 436
Query: 344 EKDHRV 327
H++
Sbjct: 437 NATHKM 442
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 411 KRLKTQMKE---VDLEAKRAFVHWYVGEGMEEGEFSKPVRTWLPSR-RIT 548
K +TQ E V++ KR VHW +G G + S P+ ++PS R+T
Sbjct: 2307 KGRRTQPSEHLAVEIRDKRVVVHWDIGSGKKMITNSHPI-NYVPSNDRVT 2355
>Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical
protein C08F8.5 protein.
Length = 585
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = -3
Query: 586 LTLAFSGVHADFFVILLEGSQVLTGFENSPSSIPSPTYQCTKARLASRSTSFI*VLSRFF 407
L++ F G DF++ +L SQ +T +P ++ T + + F + F
Sbjct: 314 LSICFEGCIIDFYLYMLNSSQKITPGLCAPKNVQVSTNDVKNFKWERPNLKFRNWIDHFL 373
Query: 406 SICALGFISIYAPKMVAAKK 347
I + + + K V KK
Sbjct: 374 YILNISTLDVAMGKGVRVKK 393
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 411 KRLKTQMKE---VDLEAKRAFVHWYVGEGMEEGEFSKPVRTWLPSR-RIT 548
K +TQ E V++ KR VHW +G G + S P+ ++PS R+T
Sbjct: 2307 KGRRTQPSEHLAVEIRDKRVVVHWDIGSGKKMITNSHPI-NYVPSNDRVT 2355
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 411 KRLKTQMKE---VDLEAKRAFVHWYVGEGMEEGEFSKPVRTWLPSR-RIT 548
K +TQ E V++ KR VHW +G G + S P+ ++PS R+T
Sbjct: 2307 KGRRTQPSEHLAVEIRDKRVVVHWDIGSGKKMITNSHPI-NYVPSNDRVT 2355
>Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical
protein F14H8.6 protein.
Length = 695
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 305 GDEIGKILLRIQANFENLRQGKAKLVIIAKNAPPLRKSEIEYYA 174
G+ + I LR ++ FEN+ G + ++ K LRK +EY+A
Sbjct: 397 GNMVVAINLR-KSEFENVLDGCKRFMVYRKVPNLLRKKAVEYFA 439
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,193
Number of Sequences: 27780
Number of extensions: 321668
Number of successful extensions: 978
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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