Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20619
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   149   8e-38
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.4  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   9.5  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  149 bits (361), Expect = 8e-38
 Identities = 67/81 (82%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
 Frame = +3

Query: 39  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 219 TCQVAYSRIEGD-ILCALLIH 278
           TCQ+AY RIEGD I+CA   H
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSH 81



 Score =  125 bits (301), Expect = 2e-30
 Identities = 53/66 (80%), Positives = 62/66 (93%)
 Frame = +1

Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
           VFGAMKGAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEA 218

Query: 691 FKRQFS 708
           FKRQFS
Sbjct: 219 FKRQFS 224



 Score =  107 bits (256), Expect = 4e-25
 Identities = 53/84 (63%), Positives = 54/84 (64%)
 Frame = +2

Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
           IVCAAYSHELPRYGVKVGLTNYAAAY TG                          EY VE
Sbjct: 74  IVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVE 133

Query: 437 PVDNGPGAFRCYLDVGLARTTTGA 508
           PVD GP AFRCYLDVGLARTTTG+
Sbjct: 134 PVDEGPAAFRCYLDVGLARTTTGS 157


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 381 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 464
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 159 KNKYNTPKYRLIVRLS---NKDVTCQVAYSRIEGDILCALLI 275
           KN   T   +L + +S   N  +  Q+ YS+ +G + C L+I
Sbjct: 43  KNSSTTEPKQLSLVISYQPNAHLGEQITYSKTQGSVECTLVI 84


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/43 (25%), Positives = 16/43 (37%)
 Frame = -1

Query: 323 HNLSDQPSHHNVATHVNKQRTQYVTFNPRVGHLACYIFVGETH 195
           H++S     H    HV     +Y T   R+       F+ E H
Sbjct: 459 HSISSSSKLHPTTVHVTAVLVKYETKTGRLNKGVATTFLAEKH 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,348
Number of Sequences: 2352
Number of extensions: 17085
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)