Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20619
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 147 4e-35
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 147 4e-35
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 147 4e-35
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 146 5e-35
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 113 8e-25
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 100 1e-20
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 113 bits (272), Expect = 6e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 54.4 bits (125), Expect = 4e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAA 331
IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 147 bits (356), Expect = 4e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 68 ICQIAYARIEGDMIVCAAYAH 88
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 166 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 225
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 226 YKKQFS 231
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 81 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 140
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 141 SIDGQPGAFTCYLDAGLARTTTG 163
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (355), Expect = 5e-35
Identities = 65/81 (80%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 39 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 218
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 219 TCQVAYSRIEGD-ILCALLIH 278
CQ+AY+RIEGD I+CA H
Sbjct: 61 ICQIAYARIEGDMIVCARYAH 81
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 159 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 218
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 219 YKKQFS 224
Score = 97.5 bits (232), Expect = 4e-20
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 74 IVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 133
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 134 SIDGQPGAFTCYLDAGLARTTTG 156
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 113 bits (271), Expect = 8e-25
Identities = 48/66 (72%), Positives = 60/66 (90%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 690
VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED+
Sbjct: 7 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 66
Query: 691 FKRQFS 708
+K+QFS
Sbjct: 67 YKKQFS 72
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = +2
Query: 257 IVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVE 436
IVCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 24 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVE 83
Query: 437 PVDNGPGAFRCYLDVGLARTTTG 505
+D PGAF CYLD GLARTTTG
Sbjct: 84 SIDGQPGAFTCYLDAGLARTTTG 106
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/31 (58%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 LIVRLSNKDVTCQVAYSRIEGD-ILCALLIH 278
+IVR++N+D+ CQ+AY+RIEGD I+CA H
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAH 31
Score = 37.1 bits (82), Expect = 0.062
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 511 VFGAMKGAVDGGLNVPH 561
VFGA+KGAVDGGL++PH
Sbjct: 109 VFGALKGAVDGGLSIPH 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,670,995
Number of Sequences: 237096
Number of extensions: 2264758
Number of successful extensions: 3870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3862
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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