Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20618
(715 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.46
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.5
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.7
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 9.9
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 9.9
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.46
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 630
S+ T S + G+ +P + P P+T TS+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQ 164
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 137 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 42
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 79
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 80 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 126
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 20/107 (18%), Positives = 38/107 (35%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 20/107 (18%), Positives = 37/107 (34%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMA 510
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 511 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 651
S+ T S + G+ +P + P T+ +P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPA 170
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 331 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 495
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 131 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 42
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 131 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 42
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 643 CPVESLMCTMSKEPGCLSRDTMVPTRPKLR 554
C V+S +K GC S ++ V T LR
Sbjct: 95 CSVKSESSQAAKYGGCFSGESTVLTSTGLR 124
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 347 RRLSTSCVKSSVWRPDLRMFR 409
R+++ C+KS WR L + +
Sbjct: 525 RKVTFQCLKSIAWRAFLAVLK 545
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,013
Number of Sequences: 336
Number of extensions: 4306
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -