Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20618
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 141 4e-34
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 141 4e-34
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 141 6e-34
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.91
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.1
12_02_0735 - 22636835-22639502,22639755-22640734 29 2.8
11_06_0087 - 19919224-19922304 29 2.8
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 2.8
04_03_1015 - 21734381-21736534 29 2.8
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 3.7
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.7
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 4.8
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 4.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.8
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 6.4
06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460... 28 6.4
02_05_0202 + 26708049-26709074 28 6.4
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.4
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 8.5
04_04_0040 + 22322839-22324173 28 8.5
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 28 8.5
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +2
Query: 2 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 181
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 182 LKIVKQRLIKVDGKVRTDPTYPAG 253
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 117 bits (282), Expect = 8e-27
Identities = 52/95 (54%), Positives = 68/95 (71%)
Frame = +1
Query: 256 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 435
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 436 IRYPDPLIKVNDSIQLDIATTKIMASSSLSPGTCV 540
IRYPDP+IK ND+I++D+ T KI+ G V
Sbjct: 147 IRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVV 181
Score = 103 bits (246), Expect = 2e-22
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +3
Query: 510 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 689
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKG 231
Query: 690 TKAYISLP 713
K ++SLP
Sbjct: 232 NKPWVSLP 239
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +2
Query: 2 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 181
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 182 LKIVKQRLIKVDGKVRTDPTYPAG 253
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 118 bits (284), Expect = 5e-27
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = +1
Query: 256 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 435
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 436 IRYPDPLIKVNDSIQLDIATTKIMASSSLSPGTCV 540
IRYPDPLIK ND+I++D+ T KI+ G V
Sbjct: 147 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVV 181
Score = 103 bits (247), Expect = 1e-22
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +3
Query: 510 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 689
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKG 231
Query: 690 TKAYISLP 713
K ++SLP
Sbjct: 232 NKPWVSLP 239
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 141 bits (341), Expect = 6e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +2
Query: 2 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 181
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 182 LKIVKQRLIKVDGKVRTDPTYPAG 253
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAG 101
Score = 121 bits (292), Expect = 5e-28
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = +1
Query: 256 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 435
MDVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRT
Sbjct: 103 MDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRT 162
Query: 436 IRYPDPLIKVNDSIQLDIATTKIMASSSLSPGTCV 540
IRYPDPLIK ND+I++D+ T KI+ G V
Sbjct: 163 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
Score = 100 bits (239), Expect = 1e-21
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +3
Query: 510 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG 689
FIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK
Sbjct: 188 FIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKE 247
Query: 690 TKAYISLP 713
K ++SLP
Sbjct: 248 RKPWVSLP 255
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 143 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 42
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 676 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 554
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 688 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 593
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 505
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -1
Query: 649 KVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPDSNLMKP*SS 497
K+C V+S S +PG +SRD VP KL P K P+ +P SS
Sbjct: 1554 KLCQVDS---PDSPQPGGISRDADVPKVVKLEVPPESSKEPEQAKKEPASS 1601
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 356 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 481
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 688 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 593
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 156 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 28
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 115 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 2
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 40 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 204
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 574 APSCPARDI--PAPSTLCTSRTPRDTPSP 654
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 655 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 524
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>06_03_0124 -
16942492-16945032,16945478-16945572,16945966-16946076,
16946142-16946229
Length = 944
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +2
Query: 56 LDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTD 235
+++L VY T +E P+ I + E L V ++ G R+
Sbjct: 73 VEELSNVYRGAQETNRKLYQELFPIQIMQMCGWLLKVVRWENLNCVH---MEAHGNRRSS 129
Query: 236 PTYPAGLWMLSQLRRLMNC 292
PTY LWM+S L+ C
Sbjct: 130 PTYLVMLWMISVASLLITC 148
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 620 HNVEGAGMSLAGHDGAHTPQVTASRDHTQVPG 525
+ V +G +L GH +H A+ H Q PG
Sbjct: 268 YRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 292 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 396
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 651 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 556
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>04_04_0040 + 22322839-22324173
Length = 444
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 596 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAA 712
TSRL LR H H HG + RH++ +R R H L A
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVA 66
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 507 GFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 626
GF+K E G + + GG GR+G + R + D++ +
Sbjct: 119 GFVKREDGPVLDVVGGGGGGRIGLNLGRRTYFSPADVLAV 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,582,618
Number of Sequences: 37544
Number of extensions: 526613
Number of successful extensions: 1832
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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