Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20617
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.35 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   1.9  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   2.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +2

Query: 305 KRSATYCKACNVAM---CIYTCYETYHTLH*NFT 397
           K     C+ CN+A     +YT +  YH  H  FT
Sbjct: 467 KEEGNSCQYCNIAFGDAVLYTIHMGYHGFHNPFT 500


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = -1

Query: 166 INAFRKFRCANDLSFSKI*EFRTLTFKSLLKNFLYHTVVFLLSMGYIASNWSL 8
           + +F    CA+ LSF K  +   L  + +   F +H+ +  +    +AS W L
Sbjct: 67  LTSFGYLFCAS-LSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 296 VCPKRSATYCKACNVAMCI 352
           V  K++ T CKAC +  C+
Sbjct: 49  VINKKNRTACKACRLRKCL 67


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 599 LPGSCHQCNSQSLEMAHKLSA 661
           L GSC QC  Q ++   K+ A
Sbjct: 73  LRGSCPQCTPQEMKQIQKVLA 93


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 606 PGNYRHIISLHTQKKCRTHNAAFSFSTSQQYGCNNN 499
           P    HI   +   K  T++A   +S ++ Y C  N
Sbjct: 160 PTPVTHIFLQNLILKENTYDAVIKWSPNEDYSCEYN 195


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 548 LCVLHFFC 571
           LC+ HFFC
Sbjct: 164 LCIYHFFC 171


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 64  YHTVVFLLSMGYI 26
           Y  VVF++ MGYI
Sbjct: 96  YSVVVFVVVMGYI 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,862
Number of Sequences: 336
Number of extensions: 4298
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)