Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20617
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable e... 76 1e-13
AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens ... 76 1e-13
AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein. 76 1e-13
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 33 1.3
BC114613-1|AAI14614.1| 357|Homo sapiens NCOA6 protein protein. 32 1.8
BC010545-1|AAH10545.1| 477|Homo sapiens zinc finger protein 622... 31 4.1
BC008752-1|AAH08752.1| 477|Homo sapiens zinc finger protein 622... 31 4.1
AY046059-1|AAL02121.1| 477|Homo sapiens zinc finger-like protei... 31 4.1
AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 27 6.0
BC099650-1|AAH99650.1| 907|Homo sapiens leucine-rich repeat-con... 30 7.1
BC096326-1|AAH96326.1| 883|Homo sapiens LGR5 protein protein. 30 7.1
BC096325-1|AAH96325.1| 883|Homo sapiens LGR5 protein protein. 30 7.1
BC096324-1|AAH96324.1| 907|Homo sapiens leucine-rich repeat-con... 30 7.1
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 30 7.1
AF062006-1|AAC28019.1| 907|Homo sapiens orphan G protein-couple... 30 7.1
AF061444-1|AAC77911.1| 907|Homo sapiens G protein-coupled recep... 30 7.1
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 30 9.4
BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable e... 30 9.4
BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein. 30 9.4
BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable e... 30 9.4
AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable e... 30 9.4
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 30 9.4
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 30 9.4
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 30 9.4
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 30 9.4
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 30 9.4
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 30 9.4
>BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable
element derived 4 protein.
Length = 585
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Frame = +3
Query: 3 DRKDQLLAMYPIERRKTTVWYKKFFRRLLNVSVLNSYILLK----DKSLAHRNFRKALIT 170
D DQ+L YP ER++ VWYKKFF LL+++VLNSYIL K + +++H NFR ALI
Sbjct: 432 DSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKKDNPEHTMSHINFRLALIE 491
Query: 171 ELLAVHKKP 197
+L H KP
Sbjct: 492 RMLEKHHKP 500
Score = 33.9 bits (74), Expect = 0.58
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 305 KRSATYCKACNVAMCIYTCYETYHT 379
K + +C C+V +C+ C+E YHT
Sbjct: 557 KETRYFCAECDVPLCVVPCFEIYHT 581
>AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ37497 fis, clone BRAWH2015853. ).
Length = 332
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Frame = +3
Query: 3 DRKDQLLAMYPIERRKTTVWYKKFFRRLLNVSVLNSYILLK----DKSLAHRNFRKALIT 170
D DQ+L YP ER++ VWYKKFF LL+++VLNSYIL K + +++H NFR ALI
Sbjct: 179 DSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKKDNPEHTMSHINFRLALIE 238
Query: 171 ELLAVHKKP 197
+L H KP
Sbjct: 239 RMLEKHHKP 247
Score = 33.9 bits (74), Expect = 0.58
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 305 KRSATYCKACNVAMCIYTCYETYHT 379
K + +C C+V +C+ C+E YHT
Sbjct: 304 KETRYFCAECDVPLCVVPCFEIYHT 328
>AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein.
Length = 581
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Frame = +3
Query: 3 DRKDQLLAMYPIERRKTTVWYKKFFRRLLNVSVLNSYILLK----DKSLAHRNFRKALIT 170
D DQ+L YP ER++ VWYKKFF LL+++VLNSYIL K + +++H NFR ALI
Sbjct: 432 DSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKEDNPEHTMSHINFRLALIE 491
Query: 171 ELLAVHKKP 197
+L H KP
Sbjct: 492 RMLEKHHKP 500
Score = 33.9 bits (74), Expect = 0.58
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 305 KRSATYCKACNVAMCIYTCYETYHT 379
K + +C C+V +C+ C+E YHT
Sbjct: 557 KETRYFCAECDVPLCVVPCFEIYHT 581
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 335 NVAMCIYTCYETYHTLH*NFTDHCHLLIYTHAHAHT 442
++ CI+TC +T HT H H H L YTH H HT
Sbjct: 16 HIRTCIHTCTDT-HT-H----MHTHTLTYTHIHMHT 45
>BC114613-1|AAI14614.1| 357|Homo sapiens NCOA6 protein protein.
Length = 357
Score = 32.3 bits (70), Expect = 1.8
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARNGLP 317
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N +P
Sbjct: 297 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSNPVP 355
>BC010545-1|AAH10545.1| 477|Homo sapiens zinc finger protein 622
protein.
Length = 477
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 209 HLNKISSTLPSTVPFFKSGKSDRLRRKCAVCP---KRSATYCKACNVAMCIYTCYETY 373
H + + S P G +R+R + AV K SATYC C+ + YE +
Sbjct: 28 HRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEESKGSATYCTVCSKKFASFNAYENH 85
>BC008752-1|AAH08752.1| 477|Homo sapiens zinc finger protein 622
protein.
Length = 477
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 209 HLNKISSTLPSTVPFFKSGKSDRLRRKCAVCP---KRSATYCKACNVAMCIYTCYETY 373
H + + S P G +R+R + AV K SATYC C+ + YE +
Sbjct: 28 HRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEESKGSATYCTVCSKKFASFNAYENH 85
>AY046059-1|AAL02121.1| 477|Homo sapiens zinc finger-like protein 9
protein.
Length = 477
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 209 HLNKISSTLPSTVPFFKSGKSDRLRRKCAVCP---KRSATYCKACNVAMCIYTCYETY 373
H + + S P G +R+R + AV K SATYC C+ + YE +
Sbjct: 28 HRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEESKGSATYCTVCSKKFASFNAYENH 85
>AK128694-1|BAC87575.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ46861 fis, clone UTERU3011092. ).
Length = 291
Score = 30.7 bits (66), Expect = 5.4
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +2
Query: 323 CKACNVAMCIYTCYETYHTLH*NFTDHCHLLIYTHAHAHTQGIWALVLEILIKNYKAGEL 502
C + MCI+ Y H T H ++ Y H HA+ + + I Y +
Sbjct: 128 CTHMHTYMCIHM-YTCIHICVFMCTMHAYVYSYVHMHAYVCVHMYTCVHMCIHKYTCMHM 186
Query: 503 LLHPYCC 523
+H Y C
Sbjct: 187 CIHMYTC 193
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 30.7 bits (66), Expect = 5.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 353 YTCYETYHTLH*NFTDHCHLLIYTHAHAHT 442
+TC Y + H H+ IYTH H HT
Sbjct: 130 HTCTHIYTCTYTVVCTHTHMHIYTHMHTHT 159
Score = 30.7 bits (66), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 350 IYTCYETYHTLH*NFTDHCHLLIYTHAHAHT 442
I+TC + H N H H+ ++ H H HT
Sbjct: 277 IHTCTHMHSHAHINTHTHAHIHMHMHTHTHT 307
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 26.6 bits (56), Expect(2) = 6.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 444 CVCACACVYI 415
C CACACVY+
Sbjct: 84 CECACACVYV 93
Score = 22.6 bits (46), Expect(2) = 6.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 438 CACACVYINK 409
C CACVY+ K
Sbjct: 100 CKCACVYVCK 109
>BC099650-1|AAH99650.1| 907|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 5 protein.
Length = 907
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 339 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 372
>BC096326-1|AAH96326.1| 883|Homo sapiens LGR5 protein protein.
Length = 883
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 315 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 348
>BC096325-1|AAH96325.1| 883|Homo sapiens LGR5 protein protein.
Length = 883
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 315 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 348
>BC096324-1|AAH96324.1| 907|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 5 protein.
Length = 907
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 339 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 372
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 374 HTLH*NFTDHCHLLIYTHAHAHT 442
HT H ++T H HL TH H HT
Sbjct: 156 HTSHYSYTYHRHLSHTTHTHTHT 178
>AF062006-1|AAC28019.1| 907|Homo sapiens orphan G protein-coupled
receptor HG38 protein.
Length = 907
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 339 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 372
>AF061444-1|AAC77911.1| 907|Homo sapiens G protein-coupled receptor
LGR5 protein.
Length = 907
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 286 QMRRLPETVCHVLQSLQCGNVYLYLL*DIPHFTL 387
Q+ LP+TVC+ L +LQ ++ LL D+P F++
Sbjct: 339 QISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSV 372
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 356 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 411
>BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 257 KSGKSDRLRRKCAVCPKRSATYCKACNVAMCIYTCYETYHT 379
K GK R CA C K + C+ C+VA+ + C YHT
Sbjct: 557 KQGKQTR----CAECHKNTTFRCEKCDVALHV-KCSVEYHT 592
>BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.
Length = 1061
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 257 KSGKSDRLRRKCAVCPKRSATYCKACNVAMCIYTCYETYHT 379
K GK R CA C K + C+ C+VA+ + C YHT
Sbjct: 1025 KQGKQTR----CAECHKNTTFRCEKCDVALHV-KCSVEYHT 1060
>BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 257 KSGKSDRLRRKCAVCPKRSATYCKACNVAMCIYTCYETYHT 379
K GK R CA C K + C+ C+VA+ + C YHT
Sbjct: 557 KQGKQTR----CAECHKNTTFRCEKCDVALHV-KCSVEYHT 592
>AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 257 KSGKSDRLRRKCAVCPKRSATYCKACNVAMCIYTCYETYHT 379
K GK R CA C K + C+ C+VA+ + C YHT
Sbjct: 557 KQGKQTR----CAECHKNTTFRCEKCDVALHV-KCSVEYHT 592
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor
coactivator 6 protein.
Length = 2063
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 395
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor
coactivator protein.
Length = 2063
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 395
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional
coactivator AIB3 protein.
Length = 2001
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 278 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 333
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 395
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 395
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor
coactivator RAP250 protein.
Length = 2063
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 138 AHRNFRKALITELLAVHKKPKPTIISTKSQVHCPAPYPFSRAESQTALDANAPSARN 308
A++ ++KA + + + +P++ + ++ H P PYPF ++ A N P N
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQA-HTNFPQMSN 395
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,040,536
Number of Sequences: 237096
Number of extensions: 2478657
Number of successful extensions: 5459
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5349
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -