Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20616
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL117204-34|CAB55140.2|  348|Caenorhabditis elegans Hypothetical...    29   3.7  
U61953-2|AAC48081.1|  356|Caenorhabditis elegans Seven tm recept...    28   4.9  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z70754-3|CAA94773.1|  293|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical
           protein F35C11.4 protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 73  NFLYHTVVFLLSMGYIASNWSL 8
           NFLY TV+FLL   Y   N+SL
Sbjct: 92  NFLYQTVIFLLEQQYGTFNYSL 113


>AL117204-34|CAB55140.2|  348|Caenorhabditis elegans Hypothetical
           protein Y116A8C.40 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/55 (20%), Positives = 26/55 (47%)
 Frame = +3

Query: 408 HLLIYTHAHAHTQGIWALVLEILIKNYKAGELLFHPYCCEVLNENAALCVLHFFC 572
           +L+ Y         IW ++ E ++ +YKA  ++   Y   + N + +  ++  +C
Sbjct: 36  YLMCYISLFEVYYSIWDMMTEPIVHSYKAAFVVLRDYNGSIFNRDVSFVLVCIYC 90


>U61953-2|AAC48081.1|  356|Caenorhabditis elegans Seven tm receptor
           protein 185 protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/57 (19%), Positives = 27/57 (47%)
 Frame = +3

Query: 408 HLLIYTHAHAHTQGIWALVLEILIKNYKAGELLFHPYCCEVLNENAALCVLHFFCVC 578
           +L+IY  +      +W +  E ++ +YKA  ++F  +     +   +  ++  +C C
Sbjct: 46  YLMIYISSFEALYSLWDVTTEPMVHSYKAAFVVFRNFKNSDFDREHSFILIVIYCGC 102


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 282 RRKCAVCPKRSATYCKACNVAMCIYTC 362
           R KC  C +R  T C+ C    C   C
Sbjct: 89  RPKCCCCCRRCCTCCRTCCCTRCCTCC 115


>AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical
           protein Y94A7B.9 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 456 ALVLEILIKNYKAGELLF--HPYCCEVLNENAALCVLHF 566
           ++ +E+ +   KA + LF  HP  C+V+ + + + V++F
Sbjct: 149 SIYIEVPVDQNKARQFLFKSHPQACKVITDKSKIFVMNF 187


>Z70754-3|CAA94773.1|  293|Caenorhabditis elegans Hypothetical
           protein F58E6.3 protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 285 RKCAVCPKRSATYCKACNVA-MCIYT--CYETYHTLH 386
           R C  CP  + TY +  N A MC +T  C  + H  H
Sbjct: 186 RICKTCPVSTTTYQQGANTAKMCEWTNQCKASTHNCH 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,709,045
Number of Sequences: 27780
Number of extensions: 354449
Number of successful extensions: 1051
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)