Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20615
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 30 0.62
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 30 0.62
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 30 0.62
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 0.82
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 1.1
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 1.1
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 29 1.9
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 29 1.9
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 2.5
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 28 2.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 4.4
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 4.4
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 4.4
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 4.4
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 27 5.8
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 27 5.8
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 27 5.8
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 27 5.8
U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 30.3 bits (65), Expect = 0.62
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 117 TRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYDAMAKSYS 278
T+ + + E+ D NG AL+ G D A+ K L G+K+DYD A+ S
Sbjct: 1150 TKLKGDIEELDRNGMT-ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 1202
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 30.3 bits (65), Expect = 0.62
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -2
Query: 390 MVSISSLAEKMQVLVLGDSPSIDTEPPDSSRPPAMSTSNMTSP*RRSRVLIRPS 229
+VS SS V+ +PS P +S P STSN T+P +S V PS
Sbjct: 466 VVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTP--KSTVTASPS 517
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 30.3 bits (65), Expect = 0.62
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 117 TRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYDAMAKSYS 278
T+ + + E+ D NG AL+ G D A+ K L G+K+DYD A+ S
Sbjct: 1150 TKLKGDIEELDRNGMT-ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 1202
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 0.82
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -2
Query: 336 SPSIDTEPPDSSRPPAMSTSNMTSP*RRSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGN 157
SPS PP + R + S S +P R P R R +P P P+R +
Sbjct: 307 SPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKS 366
Query: 156 RS 151
RS
Sbjct: 367 RS 368
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 148 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTT 258
T T +AT P +TQPT+T T P +TTT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTT 248
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 148 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTT 258
T T +AT P +TQPT+T T P +TTT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTT 244
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 148 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTT 258
T T +AT P +TQPT+T T P +TTT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTT 187
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 114 KTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYDAM-AKSY 275
K RKR++K K PNG G G + A SA S +DY AM A+ Y
Sbjct: 55 KNRKREQKHKMLPNG----TTSGTSDTGNQVPAT----SSAASSVDYTAMNAQDY 101
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 114 KTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYDAM-AKSY 275
K RKR++K K PNG G G + A SA S +DY AM A+ Y
Sbjct: 55 KNRKREQKHKMLPNG----TTSGTSDTGNQVPAT----SSAASSVDYTAMNAQDY 101
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = -2
Query: 423 ISFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPDSSRPPAMSTSNMTSP*RRSRV 244
I +N + S ++++ +M+ +GD+P + PP + P +S + SR+
Sbjct: 618 ILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---SSGILRGENFSRM 674
Query: 243 LIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 124
P LG + R + +P +P +++ +T++ LF
Sbjct: 675 SFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = -2
Query: 423 ISFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPDSSRPPAMSTSNMTSP*RRSRV 244
I +N + S ++++ +M+ +GD+P + PP + P +S + SR+
Sbjct: 524 ILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---SSGILRGENFSRM 580
Query: 243 LIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 124
P LG + R + +P +P +++ +T++ LF
Sbjct: 581 SFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = -2
Query: 423 ISFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPDSSRPPAMSTSNMTSP*RRSRV 244
I +N + S ++++ +M+ +GD+P + PP + P +S + SR+
Sbjct: 618 ILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---SSGILRGENFSRM 674
Query: 243 LIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 124
P LG + R + +P +P +++ +T++ LF
Sbjct: 675 SFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = -2
Query: 423 ISFTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPDSSRPPAMSTSNMTSP*RRSRV 244
I +N + S ++++ +M+ +GD+P + PP + P +S + SR+
Sbjct: 524 ILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---SSGILRGENFSRM 580
Query: 243 LIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 124
P LG + R + +P +P +++ +T++ LF
Sbjct: 581 SFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 142 SMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTT 258
S T TV+ T + P +T PT+T T P TTT
Sbjct: 252 STTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTT 290
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 85 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 186
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 85 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 186
KN+Y N + +E K R +S W RVW
Sbjct: 493 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 526
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 85 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 186
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 85 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 186
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 315 PPDSSRPPAMSTSNMTSP*RRSRVLIRPSLGTCRLRRDRHRPAPDPVPE 169
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 315 PPDSSRPPAMSTSNMTSP*RRSRVLIRPSLGTCRLRRDRHRPAPDPVPE 169
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 315 PPDSSRPPAMSTSNMTSP*RRSRVLIRPSLGTCRLRRDRHRPAPDPVPE 169
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 99 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 142
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 315 PPDSSRPPAMSTSNMTSP*RRSRVLIRPSLGTCRLRRDRHRPAPDPVPE 169
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical
protein K04G7.1 protein.
Length = 558
Score = 26.6 bits (56), Expect = 7.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 374 HWRRRCRCWSWA 339
HWR RC+C+S A
Sbjct: 75 HWRARCKCFSMA 86
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 333 PSIDTEPPDSSRPPAMSTSNMT 268
P+I T PP + PP TS+ T
Sbjct: 369 PTIQTPPPTTQTPPTTQTSSTT 390
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,813,476
Number of Sequences: 27780
Number of extensions: 201207
Number of successful extensions: 881
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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