Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20615
(433 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 1.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 2.6
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 3.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 3.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 4.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 7.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.8
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.6 bits (46), Expect = 1.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 339 DSPSIDTEPPDSSRPP 292
D+ + D PPDS PP
Sbjct: 652 DTTNFDEYPPDSDPPP 667
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 69 MSQKVEKPVLSGQRIKT 119
M QK+EKPVLS T
Sbjct: 314 MLQKLEKPVLSSSTTTT 330
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 3.4
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +3
Query: 66 CMSQKVEKPVLSGQRIKTRKRDEKE 140
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 3.4
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +3
Query: 66 CMSQKVEKPVLSGQRIKTRKRDEKE 140
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +3
Query: 69 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 200
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1640 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1683
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +3
Query: 69 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 200
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1636 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1679
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 71 ESEGRKTSIIGSTD 112
ESE R+ S +GST+
Sbjct: 371 ESENRRNSCLGSTE 384
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 105 DPIILVFLPSDSYNILILTGYVG 37
DP+ +V + Y ++ +TG VG
Sbjct: 48 DPLYIVLPITVIYAVIFVTGLVG 70
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 202 ISTQPTST*TRPDQNSTTTLWRSHIR 279
+ T S T P ++TT+ + HI+
Sbjct: 379 VPTTTASPTTEPSTTTSTTISQKHIK 404
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 271 HIRCTHCWRPAAVGRFGVDG 330
H+ H WRP V DG
Sbjct: 104 HVPSDHIWRPDIVLYNNADG 123
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 271 HIRCTHCWRPAAVGRFGVDG 330
H+ H WRP V DG
Sbjct: 104 HVPSDHIWRPDIVLYNNADG 123
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 271 HIRCTHCWRPAAVGRFGVDG 330
H+ H WRP V DG
Sbjct: 100 HVPSDHIWRPDIVLYNNADG 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,785
Number of Sequences: 438
Number of extensions: 2891
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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