Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20612
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0880 + 25620487-25620852,25620950-25621041,25621316-256217...    29   2.7  
11_01_0780 - 6531579-6531608,6531732-6532064,6533219-6533325,653...    28   8.2  

>06_03_0880 +
           25620487-25620852,25620950-25621041,25621316-25621789,
           25622079-25623039
          Length = 630

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 86  HQVGCELVHPSKQ*KKHLQV-SARIRLLYNYISRMSNI*FYYCICTRNPHVC 238
           H+V  +++HP ++    LQ  S R   +++    +SN+ F + I T+N  +C
Sbjct: 75  HEVAVKMLHPIRE--DQLQAFSVRFDEIFSKCQGLSNVCFLHGISTQNGRIC 124


>11_01_0780 -
           6531579-6531608,6531732-6532064,6533219-6533325,
           6534267-6534316,6535110-6537065,6537458-6538209
          Length = 1075

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 265 ENHSRISRFAYVWITCTDTIVK 200
           + HSRISRF   WI C +  V+
Sbjct: 884 KKHSRISRFNIRWINCVEEDVR 905


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,682,875
Number of Sequences: 37544
Number of extensions: 239817
Number of successful extensions: 486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)