Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20611
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.7  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 386 NMFVHTNSDPVPKGDTTPSPVTTTLR 309
           N   HT+  P P GD+   P+  +L+
Sbjct: 350 NTIKHTSCIPTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 386 NMFVHTNSDPVPKGDTTPSPVTTTLR 309
           N   HT+  P P GD+   P+  +L+
Sbjct: 350 NTIKHTSCIPTPNGDSRLPPLEISLK 375


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 661 IQTSFKSIIPMPIATPVISLQCSL 590
           IQT F   + M IA+  + + CSL
Sbjct: 234 IQTIFSVPLLMKIASQFVGIFCSL 257


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 661 IQTSFKSIIPMPIATPVISLQCSL 590
           IQT F   + M IA+  + + CSL
Sbjct: 59  IQTIFSVPLLMKIASQFVGIFCSL 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,769
Number of Sequences: 336
Number of extensions: 2764
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)