Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20611
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008202-1|AAH08202.1|  459|Homo sapiens 3-oxoacyl-ACP synthase,...    57   7e-08
AK000611-1|BAA91286.1|  459|Homo sapiens protein ( Homo sapiens ...    57   7e-08
S45332-1|AAB23271.1|  508|Homo sapiens erythropoietin receptor p...    31   4.0  
M60459-1|AAA52403.1|  508|Homo sapiens erythropoietin receptor p...    31   4.0  
M34986-1|AAA52401.1|  508|Homo sapiens EPOR protein.                   31   4.0  
BC112153-1|AAI12154.1|  508|Homo sapiens erythropoietin receptor...    31   4.0  

>BC008202-1|AAH08202.1|  459|Homo sapiens 3-oxoacyl-ACP synthase,
           mitochondrial protein.
          Length = 459

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +3

Query: 495 IVKIYLKSMAPATSLALVATSEALKDANWTPKSEHCKEMTGVAIGMGMIDLNDVCITNEA 674
           + K  +KSM+  T +A+ A   A+KD+ W P+SE  +  TGVAIGMGMI L  V  T   
Sbjct: 107 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALN 166

Query: 675 LKV-GYNKVS 701
            +  GYNKVS
Sbjct: 167 FQTKGYNKVS 176



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +1

Query: 367 LVWTNILKGKCGIVALNDEEYINLPCRLAGLIPREKD 477
           LVW  ++ G+ GIV+L  EEY ++PC +A  +PR  D
Sbjct: 61  LVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSD 97


>AK000611-1|BAA91286.1|  459|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20604 fis, clone KAT06449. ).
          Length = 459

 Score = 56.8 bits (131), Expect = 7e-08
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +3

Query: 495 IVKIYLKSMAPATSLALVATSEALKDANWTPKSEHCKEMTGVAIGMGMIDLNDVCITNEA 674
           + K  +KSM+  T +A+ A   A+KD+ W P+SE  +  TGVAIGMGMI L  V  T   
Sbjct: 107 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALN 166

Query: 675 LKV-GYNKVS 701
            +  GYNKVS
Sbjct: 167 FQTKGYNKVS 176



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +1

Query: 367 LVWTNILKGKCGIVALNDEEYINLPCRLAGLIPREKD 477
           LVW  ++ G+ GIV+L  EEY ++PC +A  +PR  D
Sbjct: 61  LVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSD 97


>S45332-1|AAB23271.1|  508|Homo sapiens erythropoietin receptor
           protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 452 ANLQGRFMYSSSLRATIPHFPFNMFVHTNSDPVPKGDTTPS---PVTTTLRLTALIVLIL 282
           +NL+GR  Y+ ++RA +    F  F    S+PV     TPS   P+  TL L  +++L+L
Sbjct: 208 SNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSL--LTPSDLDPLILTLSLILVVILVL 265


>M60459-1|AAA52403.1|  508|Homo sapiens erythropoietin receptor
           protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 452 ANLQGRFMYSSSLRATIPHFPFNMFVHTNSDPVPKGDTTPS---PVTTTLRLTALIVLIL 282
           +NL+GR  Y+ ++RA +    F  F    S+PV     TPS   P+  TL L  +++L+L
Sbjct: 208 SNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSL--LTPSDLDPLILTLSLILVVILVL 265


>M34986-1|AAA52401.1|  508|Homo sapiens EPOR protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 452 ANLQGRFMYSSSLRATIPHFPFNMFVHTNSDPVPKGDTTPS---PVTTTLRLTALIVLIL 282
           +NL+GR  Y+ ++RA +    F  F    S+PV     TPS   P+  TL L  +++L+L
Sbjct: 208 SNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSL--LTPSDLDPLILTLSLILVVILVL 265


>BC112153-1|AAI12154.1|  508|Homo sapiens erythropoietin receptor
           protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 452 ANLQGRFMYSSSLRATIPHFPFNMFVHTNSDPVPKGDTTPS---PVTTTLRLTALIVLIL 282
           +NL+GR  Y+ ++RA +    F  F    S+PV     TPS   P+  TL L  +++L+L
Sbjct: 208 SNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSL--LTPSDLDPLILTLSLILVVILVL 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,483,759
Number of Sequences: 237096
Number of extensions: 1490101
Number of successful extensions: 2912
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2905
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)