Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20609
         (473 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    47   2e-04
UniRef50_Q9CVL5 Cluster: 10 day old male pancreas cDNA, RIKEN fu...    34   1.8  
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.8  
UniRef50_A7BSS7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   5.6  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   7.4  
UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   7.4  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 24/24 (100%)
 Frame = +1

Query: 289 YYGNLVAGSIVSQLTAAAMVAPTP 360
           YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 51  YYGNVVAGSVISQLTSAAMLAPTP 74



 Score = 45.2 bits (102), Expect = 7e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +2

Query: 188 IYGTGGLLTPLVAPVLGFSSAG 253
           IYGTGGLLTP+VAP+LGF SAG
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAG 38


>UniRef50_Q9CVL5 Cluster: 10 day old male pancreas cDNA, RIKEN
           full-length enriched library, clone:1810022E02
           product:similar to CICK0721Q.5; n=1; Mus musculus|Rep:
           10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810022E02 product:similar to
           CICK0721Q.5 - Mus musculus (Mouse)
          Length = 175

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -3

Query: 405 ILERCRERVMFSITSWRGGYH--GSSSQL*HNAAGH*ISVVCLCSSGCASCRFPAELKPS 232
           +L  C ER + S   ++ G H  G+ ++      GH   VV L +S  A   FP  +   
Sbjct: 2   VLRPCNERPLISSFLYQRGLHELGAGARRLARRRGHSAPVVSLDASATAG-GFPPSVATP 60

Query: 231 TGATNGVNRPPVP 193
           + A NG  +P VP
Sbjct: 61  SSAVNGFWKPSVP 73


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 124 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 237
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_A7BSS7 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 424

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 203 GLLTPLVAPVLGFSSAGKRQEAQPLLHKHTTEI*WPAALCHS*LLLPW*PPRHEVMLNIT 382
           G++      +LG  +AG+    Q L+  + T + W  AL  S L  P  P RH+ +L+I 
Sbjct: 21  GIVALSTLGILGIETAGRNIPQQDLIADYFTALAWAIALALSILFWPV-PTRHKRVLSIV 79

Query: 383 -RSRHRSRIGPFLFY 424
             ++    +G  LFY
Sbjct: 80  WLAKIFVTLGVMLFY 94


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 103 LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 222
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 233 AREPLMESTDPQCHILQHRRPRLPLMQLE 147
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 82

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 240 SAQRESGRKHSRCCTSILRKFSGRQHCVTVDCCCHGSP 353
           +A   SG     C       F G  HCV+  CCC+G P
Sbjct: 31  TANIPSGTYQIACVECPCDGFDGPCHCVSDGCCCNGGP 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,311,020
Number of Sequences: 1657284
Number of extensions: 8122146
Number of successful extensions: 18723
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18722
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)