Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20608
(359 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0841 + 23579344-23579394,23579522-23579584,23579717-235798... 78 2e-15
08_01_0098 - 700443-700660,701112-701268,701586-701678,701763-70... 49 1e-06
03_02_0120 - 5728572-5728712,5728812-5728916,5729178-5729441,572... 36 0.013
07_03_0409 + 17817046-17817126,17818320-17818523,17818744-178188... 33 0.089
07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,557... 33 0.089
10_05_0065 + 8736744-8738879 32 0.16
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 30 0.48
10_08_0520 - 18495118-18498237 29 1.1
05_03_0328 - 12468142-12468262,12468443-12468641,12468758-124689... 29 1.1
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301... 29 1.5
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 29 1.5
06_01_0992 - 7705550-7705629,7706046-7706676,7707217-7707669 29 1.5
05_01_0177 + 1231679-1231753,1232259-1232546,1232608-1232685,123... 29 1.5
01_01_1127 + 8930593-8932681,8932812-8933401 28 1.9
08_02_1275 - 25792148-25792227,25792457-25792488,25792590-257926... 28 2.5
08_01_0322 - 2898272-2898475,2898548-2898730,2898817-2899702,290... 27 3.4
06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915 27 3.4
02_04_0611 + 24347384-24350015,24350126-24350497,24350561-243508... 27 3.4
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 27 3.4
08_01_0535 - 4638954-4639127,4639894-4639944,4640287-4640352,464... 27 4.4
05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033 27 4.4
03_06_0641 - 35232858-35232892,35233066-35233290,35233785-352339... 27 5.9
01_06_0261 + 27978341-27978391,27978539-27978683,27978794-279788... 27 5.9
10_08_1027 - 22404169-22404807,22406148-22406360,22407062-224072... 26 7.7
10_08_1023 - 22341815-22342042,22342179-22342247,22342717-223428... 26 7.7
10_01_0103 + 1253613-1253783,1253994-1254758,1254860-1255228 26 7.7
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200... 26 7.7
05_01_0326 - 2558237-2558344,2558605-2558706,2558867-2558944,255... 26 7.7
>12_02_0841 +
23579344-23579394,23579522-23579584,23579717-23579826,
23580220-23580320,23580816-23580877,23580972-23581112,
23581388-23581523,23582257-23582284,23582665-23582728,
23582924-23583044,23583565-23583623,23583716-23583784,
23583875-23584015,23584130-23584194,23584345-23584441,
23584803-23584862,23585409-23585561,23586022-23586088,
23586174-23586284,23586689-23586799,23587370-23587567,
23587679-23587860
Length = 729
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 MYEKLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETK 182
+YEKL++ FPT +YWK Y+E M A++ E +++F RCL+ L I LWR Y+N+++
Sbjct: 27 IYEKLLSTFPTAAKYWKQYVEAYMSAKDDEATKQIFSRCLLSCLQINLWRCYINFIRRVN 86
Query: 183 CMLPT-YKEKMAQAYDFALDKIGLD 254
+ E+ +A+DF L+ +G D
Sbjct: 87 DKRGSDGLEETKKAFDFMLNYVGND 111
Score = 34.7 bits (76), Expect = 0.022
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 266 PIWNDYVTFLKSVEAVGSYAENQKISAVQKI 358
P+W DY+ FLKS+ V E+ +++ V+K+
Sbjct: 116 PVWMDYIAFLKSMPVVTPQEESHRMTTVRKV 146
>08_01_0098 -
700443-700660,701112-701268,701586-701678,701763-702149,
702755-702829,703486-703609,703693-703832,703904-703993,
704254-704298,704917-705042,705138-705272,705966-706451,
706539-706596,706728-706855,707209-707463
Length = 838
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Frame = +3
Query: 9 EKLITAFPTTGRYWKIYIEQEMKAR--NFERVEKLFQRCLMKILNIELWRLYLNYVKE-- 176
E++ FP T + W+ + + E R +FE +EKL++R + + L++ LWR YL++V+E
Sbjct: 104 EEMNKYFPLTPKMWQEWTKDEASLRPESFEDIEKLYERGVQEYLSVRLWRDYLDFVEEND 163
Query: 177 ---TKCMLPTYKEKMAQAYDFALDKIGLDST 260
++C P+ KM ++ A+ GL T
Sbjct: 164 KSVSQCS-PSGLTKMRNLFERAITAGGLHVT 193
>03_02_0120 -
5728572-5728712,5728812-5728916,5729178-5729441,
5729809-5729958,5730070-5730150,5730481-5730597,
5730679-5730831,5731426-5731569,5731773-5731802,
5732070-5732430,5732682-5732849,5733371-5733600,
5734088-5734194,5734275-5734623
Length = 799
Score = 35.5 bits (78), Expect = 0.013
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 MYEKLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCLMKI-LNIELWRLYLNYVKET 179
+Y+ + FP YWK Y + E + +V ++++R ++ + ++++W Y + T
Sbjct: 161 VYDAFLAEFPLCFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAIST 220
>07_03_0409 +
17817046-17817126,17818320-17818523,17818744-17818856,
17819446-17819491,17819741-17819787,17820250-17820325,
17820865-17820937,17821059-17821204,17821382-17821467,
17821734-17821873,17821944-17822083,17822171-17822221,
17823644-17823702,17823793-17823949,17824793-17824845,
17824936-17825034,17825876-17825990,17826075-17826197,
17826417-17826584
Length = 658
Score = 32.7 bits (71), Expect = 0.089
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 44 LLENIYRTGDESEKF*KSRKALPEVSDEDIKH 139
LL NIY+T E+ K+ RK + +V DED+ H
Sbjct: 271 LLRNIYQTICENPKYASMRKRIGDVIDEDVVH 302
>07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,
5572773-5572949,5573049-5573145,5573575-5573687,
5573774-5573896,5574004-5574075,5575340-5575432,
5575564-5575674,5575767-5575889,5576834-5576890,
5576939-5577022,5577140-5577214,5577418-5577554,
5577719-5577853,5579029-5579168,5579334-5579399,
5579732-5579838,5579910-5579990,5580064-5580138,
5580224-5580325,5581837-5582005,5582090-5582217,
5582596-5582679,5582779-5582879,5583729-5583882,
5583964-5584038,5584112-5584262,5584463-5585078,
5585427-5585487,5585874-5586019,5586104-5586287,
5586363-5586440,5586603-5586931,5587023-5587199,
5587571-5587667,5587742-5587897,5587962-5588198,
5588271-5588354,5588426-5588486,5588762-5588898
Length = 1912
Score = 32.7 bits (71), Expect = 0.089
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +3
Query: 6 YEKLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCLMKILNIELWRLYL 161
+E ++ +P W +Y++QE++ + E + LF+R L + ++YL
Sbjct: 1799 FELILREYPKRTDLWSVYLDQEIRLGDTEIIRALFERVTCLSLPPKKMKIYL 1850
>10_05_0065 + 8736744-8738879
Length = 711
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 48 WKIYIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETKC 185
W YI+ E+ A +R +L++R L K ++ +W Y + + T C
Sbjct: 537 WTDYIQFEIDAGELDRARQLYERLLGKTQHLNVWVSYAEF-EATAC 581
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 30.3 bits (65), Expect = 0.48
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 48 WKIYIEQEMKARNFERVEKLFQRCLMKILNI-ELWRLYLNYV 170
W Y++ K +F+ KL++RCL+ N E W Y +V
Sbjct: 302 WHRYLDFVEKKGDFDWAVKLYERCLIPCANYSEFWIRYAEFV 343
Score = 29.5 bits (63), Expect = 0.83
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 MYEKLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCLMKI-LNIELWRLYLNYVKET 179
+Y + FP YW Y + + ++VE+++++ + + +I+LW Y +
Sbjct: 75 VYHSFLLEFPLCYGYWIKYAAHKARLCTNKQVEEVYEQAVQAVPHSIDLWVSYCGFA--- 131
Query: 180 KCMLPTYKE--KMAQAYDFALDKIGLD 254
+ TY+E + + ++ AL +G D
Sbjct: 132 ---MCTYEEPAHIRRLFERALSLVGKD 155
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 12 KLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCL 122
+ +T P G +W +Y + E++ N + + + QRC+
Sbjct: 957 RAVTLAPDIGDFWALYYKFELQHGNADTQKDVLQRCV 993
>05_03_0328 -
12468142-12468262,12468443-12468641,12468758-12468974,
12469896-12469994,12470843-12470899,12470943-12472577
Length = 775
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 39 GRYWKIYIEQEMKARNFERVEKLFQRCL-MKILNIELWRLYLNYVKETKCMLPTYKEKMA 215
G+ +K YIE E+ NF+R L+++ + N WR Y K + ++
Sbjct: 471 GKIFKKYIEIELYLGNFDRCRTLYEKYIEWSPANCYAWRKYAELEKNL-----SETDRAR 525
Query: 216 QAYDFALDKIGLDS 257
Y+ A+ + LD+
Sbjct: 526 SIYELAIAQPALDT 539
Score = 27.9 bits (59), Expect = 2.5
Identities = 9/37 (24%), Positives = 22/37 (59%)
Frame = +3
Query: 57 YIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNY 167
Y++ E+ F+R +L++R L + ++++W Y +
Sbjct: 599 YLQFEIDENEFDRTRELYERLLDRTKHLKVWISYTEF 635
>08_02_1512 +
27627740-27629009,27629111-27629256,27629842-27630101,
27630346-27630412,27630511-27630545,27630818-27631587,
27631633-27631793
Length = 902
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 35 HRTLLENIYRTGDESEKF*KSRKALPEVSDEDIKHRTLEAVPELREGD 178
HR ++ F + +ALP S D+ H +P+LR+GD
Sbjct: 43 HRAYAASLRDAAAALHDFLRGVQALPPPSSSDVDHAAPLRLPDLRKGD 90
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 39 GRYWKIYIEQEMKARNFERVEKLFQRCL-MKILNIELWRLYLNYVKETKCMLPTYKEKMA 215
G+ +K YIE E+ NFER L+++ + N W + Y + K + T ++
Sbjct: 456 GKIFKKYIEIELYLGNFERCRTLYEKYIEWSPANCYAW---MKYAELEKSLGET--DRAR 510
Query: 216 QAYDFALDKIGLDS 257
Y+ A+ + LD+
Sbjct: 511 SIYELAIAQSALDT 524
>06_01_0992 - 7705550-7705629,7706046-7706676,7707217-7707669
Length = 387
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +2
Query: 128 DIKHRTLEAVPELREGDEVHATHLQGENGAGLRLRPGQDRSGLHAYPIWNDYVTFLKSVE 307
D+ TL +P ++VH L G GL +RS LH + D L+ V
Sbjct: 233 DMATMTLSVIPSPPLPEDVHGALLMTAEGGGLGFAAVLERSNLHLWSKSMDQWEHLEDVR 292
Query: 308 AVGSYAENQKISAVQKI 358
+ + IS + +
Sbjct: 293 DLKTLLPRGSISMMNNV 309
>05_01_0177 +
1231679-1231753,1232259-1232546,1232608-1232685,
1233458-1233673,1233862-1233981,1234079-1234804
Length = 500
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 107 LPEVSDEDIKHRTLEAVPE 163
+PEV E KH T+EAVPE
Sbjct: 70 VPEVEQEQSKHVTVEAVPE 88
>01_01_1127 + 8930593-8932681,8932812-8933401
Length = 892
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 12 KLITAFPTTGRYWKIYIEQEMKARNFERVEKLFQRCL 122
+ +T P G +W +Y + E++ N + + + QRC+
Sbjct: 810 RAVTLAPDIGDFWALYYKFELQHGNADTHKDVVQRCV 846
>08_02_1275 -
25792148-25792227,25792457-25792488,25792590-25792651,
25792721-25792801,25793086-25793241,25793292-25793348,
25793349-25793510,25793586-25793648,25793742-25793804,
25793895-25793948,25794334-25794390,25794479-25794547,
25795053-25795166,25795245-25795316,25795406-25795527,
25796416-25796617
Length = 481
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/63 (20%), Positives = 33/63 (52%)
Frame = +2
Query: 11 EVDNGIPDHRTLLENIYRTGDESEKF*KSRKALPEVSDEDIKHRTLEAVPELREGDEVHA 190
+ + + + ++ + +T DE ++ +S + +V++E++ LEA + ++ EVH
Sbjct: 156 DAEKRVQELNAKIDALQKTNDEQKRKLQSTERALKVAEEELMRLHLEATTKSKQLTEVHG 215
Query: 191 THL 199
L
Sbjct: 216 AWL 218
>08_01_0322 -
2898272-2898475,2898548-2898730,2898817-2899702,
2902070-2902374
Length = 525
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 184 HFVSFT*FRYSLQSSMFNIFIRHLWKSFSTLS-KFLAFISCSIYI 53
H +SF R ++Q+ + + RH+WKS L+ K F S + Y+
Sbjct: 147 HILSFMTAREAVQTCVLSSRWRHIWKSLQCLNIKGSEFTSEAAYV 191
>06_01_1002 + 7796367-7796651,7796727-7797489,7797800-7797915
Length = 387
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +2
Query: 128 DIKHRTLEAVPELREGDEVHATHLQGENGAGLRLRPGQDRSGLHAYPIWNDYVTFLKSVE 307
D+ TL +P ++VH L G GL +RS LH + D L+ V
Sbjct: 221 DMATMTLSVIPSPLLPEDVHGALLMTAEGGGLGFAAVLERSNLHLWSKPMDEWEHLQDVR 280
Query: 308 AVGSYAENQKISAVQKI 358
+ + IS + +
Sbjct: 281 DLKTLLPRGSISMMNNL 297
>02_04_0611 + 24347384-24350015,24350126-24350497,24350561-24350805,
24350997-24351059,24351919-24352422
Length = 1271
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -1
Query: 308 LRHSSETSRSRSILGKRG--VQTYLVQGEVVG 219
+RH S +RSRS + +RG V + +Q E+VG
Sbjct: 1234 IRHQSLITRSRSAIQRRGDHVTAWQIQEELVG 1265
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 272 WNDYVTFLKSVEAVGSYAENQKI 340
W D + LKS EA+ +AEN +I
Sbjct: 168 WRDSIAVLKSCEALSPWAENLQI 190
>08_01_0535 -
4638954-4639127,4639894-4639944,4640287-4640352,
4640492-4640557,4640701-4640892,4641282-4641780,
4642009-4642364
Length = 467
Score = 27.1 bits (57), Expect = 4.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 182 VHATHLQGENGAGLRLRPGQDRSGLHAY 265
VHA + G G G +P D SG H Y
Sbjct: 100 VHAQTVAGGGGGGWNQQPFLDGSGFHGY 127
>05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033
Length = 143
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 193 PLTRRKWRRPTTSPWTR*VWTPRLPNMERLRDVSEECRSR 312
P RR+W RP T W R W RL +E V+E+ +R
Sbjct: 3 PFCRRRWGRPRT--WKR-EWRSRLRGLEFDLFVTEKIGAR 39
>03_06_0641 -
35232858-35232892,35233066-35233290,35233785-35233929,
35234295-35234406,35234477-35234535,35234981-35235022,
35235372-35235434,35235636-35235697,35236298-35236451,
35236572-35236651,35237646-35237709,35237791-35237959,
35238002-35238114,35238361-35238507
Length = 489
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 38 RTLLENIYRTGDESEKF*KSRKALPEVSDEDIKHRTLEAVPELREGDEV 184
R L E I R E E+ K ++AL ++DED K +V E+ + DEV
Sbjct: 101 RELEEMIDRLIVECER--KIQRALKRLADEDAKAAIAISVSEVTQTDEV 147
>01_06_0261 +
27978341-27978391,27978539-27978683,27978794-27978861,
27979630-27980073,27980163-27980681,27981002-27981214,
27981650-27981805,27982753-27982941
Length = 594
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 173 GDEVHATHLQGENGAGLRLRPGQD 244
G EVH T +QG+NG+ L PG +
Sbjct: 82 GLEVHPTVVQGDNGSYLCYLPGYE 105
>10_08_1027 -
22404169-22404807,22406148-22406360,22407062-22407255,
22407422-22407566,22407801-22407875,22408222-22408380,
22408466-22408645,22408756-22409243,22409375-22409738,
22409811-22409943,22410023-22410153,22410247-22410354,
22410451-22410897,22411425-22411514,22411607-22411915,
22412209-22412320,22412488-22412699
Length = 1332
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 188 HALRLLHVVQVQPPEFDV*YLHQTPL--EELFD 96
HA RLL + P+F YLH++P+ LFD
Sbjct: 490 HARRLLALTYYAGPQFLANYLHRSPVVAARLFD 522
>10_08_1023 - 22341815-22342042,22342179-22342247,22342717-22342840,
22343193-22343317,22343815-22344276,22344357-22344700,
22345061-22345406,22345492-22345941,22346760-22347051,
22347171-22347515,22347611-22347834,22348072-22348563,
22348664-22349056,22349601-22349741,22349845-22350207,
22350494-22352683,22353298-22353360,22353434-22353535,
22353672-22354027,22354326-22354413,22354517-22354750,
22355508-22355975
Length = 2632
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 202 RRKWRRPTTSPWTR*VWTPRLPNMERLRDVSE 297
RR W + + WT W + + +RLRD+ E
Sbjct: 1242 RRLWSKKSID-WTTKCWASGMSDWKRLRDIRE 1272
>10_01_0103 + 1253613-1253783,1253994-1254758,1254860-1255228
Length = 434
Score = 26.2 bits (55), Expect = 7.7
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 30 PTTGRYWKIYIEQEMKARNFERVEKLFQRC-LMKILNIELWRLYLNYVKETKCMLPTYKE 206
P RY K ++++ AR E ++ + L+ + + + LYL + K LPT +
Sbjct: 254 PFPQRYRKPSVDEQF-ARFVEVIQNIHIHVPLLDAMQVPTYALYLKDILNNKRPLPTTEV 312
Query: 207 KMAQA-YD 227
K QA YD
Sbjct: 313 KFDQALYD 320
>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
22220149-22220365,22220798-22221021,22221559-22221738,
22221875-22222013,22222107-22222255,22223394-22223505,
22223998-22224506,22224661-22224784,22224904-22225178,
22225507-22225626,22225707-22225769,22225861-22226052,
22226381-22226440,22226535-22226738,22226926-22227051,
22227093-22227254,22227357-22227476,22227665-22227820,
22227895-22227957,22228041-22228168,22228524-22228920,
22229442-22229544,22229646-22229776,22230096-22230167,
22230472-22230553,22231083-22231190,22231288-22231429,
22231659-22231698,22231746-22231876,22232215-22232301,
22232395-22232605,22232687-22232741,22232836-22232927,
22233011-22233071,22233361-22233719
Length = 2010
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 338 SSGSRRMNQRLRHSSETSRSRSILGKRGVQTYLVQGEVVGL 216
SS ++ Q L+H + S+ ILG RG+ T V + +GL
Sbjct: 932 SSNDTQVVQILQHPGKALCSQLILGARGLGTATVTIQDIGL 972
>05_01_0326 -
2558237-2558344,2558605-2558706,2558867-2558944,
2559024-2559089,2559885-2559975,2560414-2560490,
2560905-2561114,2561202-2561319,2561824-2561921,
2562037-2562102,2562189-2562351,2563542-2563674,
2563760-2563793
Length = 447
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 335 SGSRRMNQRLRHSSETSRSRSILGKRGVQT 246
S S + RLRH++ ++ + + +G+RGV T
Sbjct: 5 SNSLLLQGRLRHAAASAVAAAAMGRRGVAT 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,367,831
Number of Sequences: 37544
Number of extensions: 214149
Number of successful extensions: 706
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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