Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20608
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   1.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   1.5  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   2.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   3.5  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    22   6.1  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    22   6.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    22   6.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    22   6.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   8.0  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   8.0  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    22   8.0  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -1

Query: 359 RSFERRISSGSRRMNQRLRHSSETSRSRS 273
           RS  R   S SR    R R  + TSRSRS
Sbjct: 430 RSRSRGSRSRSRTSQSRSRSKTRTSRSRS 458


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 63  EQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETK 182
           E  ++ +  +R   L Q C  K ++ +L++LY N  KE K
Sbjct: 208 EARLEKQEADRYASLKQECSEKQVHFQLFKLYHN-EKEAK 246


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  KLITAFPTTGRYWKI 56
           KLI + PT GR WK+
Sbjct: 291 KLIVSIPTFGRGWKM 305


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 96  VEKLFQRCLMKILNIELWR--LYLNYVKETKCMLPTYKEKMAQAYDFALDKIGLD 254
           V+ L + C++++  ++ W        +KET C +  +  +  Q  D  L ++ +D
Sbjct: 693 VDDLRRLCILRLSFVKGWGPDYPRQSIKETPCWVEVHLHRALQLLDEVLHQMPID 747


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 122 QTPLEELFDSFKISRFHLLFDIY 54
           Q P+   FDSF   R H+  DI+
Sbjct: 117 QWPIRRGFDSFTYYRTHVRPDIF 139


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  EVDNGIPDHRTLLENIYRTGD 73
           EVD    DHRT + +IY  GD
Sbjct: 346 EVDE--TDHRTNVPHIYAVGD 364


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  EVDNGIPDHRTLLENIYRTGD 73
           EVD    DHRT + +IY  GD
Sbjct: 322 EVDE--TDHRTNVPHIYAVGD 340


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  EVDNGIPDHRTLLENIYRTGD 73
           EVD    DHRT + +IY  GD
Sbjct: 319 EVDE--TDHRTNVPHIYAVGD 337


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +1

Query: 187 CYPLTRRK--WRRPTTSPWT 240
           C P+  R+   R PTTS WT
Sbjct: 85  CTPVLSRQRATRAPTTSTWT 104


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 205 RKWRRPTTSPW 237
           R+W RP TS W
Sbjct: 24  RRWPRPPTSCW 34


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 89  KISRFHLLFDIYFPVTSCGR 30
           KI  FHL+FD    +   GR
Sbjct: 306 KIFPFHLMFDRNMHIVQAGR 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,107
Number of Sequences: 2352
Number of extensions: 7753
Number of successful extensions: 70
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)