Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20607
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22MX8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_Q2NJC3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q6FQ51 Cluster: Similar to sp|P43606 Saccharomyces cere...    33   6.7  

>UniRef50_Q22MX8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1145

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 20/63 (31%), Positives = 35/63 (55%)
 Frame = -3

Query: 314 KLVNQANAVQNTNISYETNTTFII*RNSIREDKKIPLISNVLHLNTNTNSYKHLICELNK 135
           K+ + +  +++TN+ Y TN  FI    S+++ ++  LIS+   +N N N       ELN 
Sbjct: 746 KISSSSEFIKDTNLFYSTN--FISKNQSMQQLQQTDLISSSYKINNNNNQNNTNKEELNL 803

Query: 134 LYL 126
           L+L
Sbjct: 804 LFL 806


>UniRef50_Q2NJC3 Cluster: Putative uncharacterized protein; n=1;
           Aster yellows witches'-broom phytoplasma AYWB|Rep:
           Putative uncharacterized protein - Aster yellows
           witches'-broom phytoplasma (strain AYWB)
          Length = 1062

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 676 IYIIK-YFPPQFR*IFSIIFYMFRAFRTSY----RHF*RKQGFPRLHKSGTHDNYSNKYN 512
           IY IK YF   F  +FSIIF+    F  SY    +   + Q   ++HK     NY N+YN
Sbjct: 4   IYKIKHYFCSIFFCLFSIIFFFIFFFWISYCLSKQKILKFQKTNKMHKQIQQINYKNEYN 63

Query: 511 DN 506
            N
Sbjct: 64  PN 65


>UniRef50_Q6FQ51 Cluster: Similar to sp|P43606 Saccharomyces
           cerevisiae YFR029w PTR3; n=1; Candida glabrata|Rep:
           Similar to sp|P43606 Saccharomyces cerevisiae YFR029w
           PTR3 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 726

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 342 KLQLYSKNTELSKH*ENYILLICSKNLNGQY-SSFPEYLRFSGTKLNYKNA 491
           K ++YS  T   +H     LL C K+ NGQY S++ E  R +  KL++ N+
Sbjct: 371 KWEVYSMPTREDRHSNTPQLLFCGKS-NGQYGSNYKELKRSANKKLDHSNS 420


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,917,247
Number of Sequences: 1657284
Number of extensions: 12955082
Number of successful extensions: 26481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26467
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)