Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20607
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 385 QCLDNSVFLEYNCNFSNPNYN 323
           QCLD S   E N   SN N+N
Sbjct: 308 QCLDLSKTKETNLEKSNLNHN 328


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 385 QCLDNSVFLEYNCNFSNPNYN 323
           QCLD S   E N   SN N+N
Sbjct: 200 QCLDLSKTKETNLEKSNLNHN 220


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 511 HYIC*SSCHGYHSCV 555
           H +C + CH Y SC+
Sbjct: 9   HELCDNFCHRYISCL 23


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 511 HYIC*SSCHGYHSCV 555
           H +C + CH Y SC+
Sbjct: 165 HELCDNFCHRYISCL 179


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = -1

Query: 205 SSQMYYI*IQTPIATSISFVN*INCICNFTPLLYSDLE 92
           + ++Y++ +  PI ++++FV  +  +C+   + YS +E
Sbjct: 551 AGELYFMSLLNPILSNVTFVIDVVYVCD---VCYSTIE 585


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/38 (23%), Positives = 24/38 (63%)
 Frame = -1

Query: 205 SSQMYYI*IQTPIATSISFVN*INCICNFTPLLYSDLE 92
           + ++Y++ +  PI ++++FV  +  +C+   + YS +E
Sbjct: 276 AGELYFMSLLNPILSNVTFVIDVVYVCD---VCYSTIE 310


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 337 SKNYNYIPKTQNYLNIEKIIFY 402
           +KN+ +I K  N  N +  +FY
Sbjct: 50  NKNFQFIDKKLNNRNSKSRVFY 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,394
Number of Sequences: 336
Number of extensions: 4236
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)