Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20607
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   9.2  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 599 TKCTKHVEDYRKNLTKLRRKVFYNINYFI 685
           T C +   D   N+T  R+ +FY +N  I
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIII 252


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 599 TKCTKHVEDYRKNLTKLRRKVFYNINYFI 685
           T C +   D   N+T  R+ +FY +N  I
Sbjct: 224 TCCDEPYLDITFNITMRRKTLFYTVNIII 252


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 599 TKCTKHVEDYRKNLTKLRRKVFYNINYFI 685
           T C +   D   N+T  R+ +FY +N  I
Sbjct: 220 TCCDEPYLDITFNITMRRKTLFYTVNLII 248


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -2

Query: 432 IGHLNFCCRSIKYNFLNV*IILCFWNIIVIFRTQIIIAFKTC 307
           + +++ CC  I Y F+N      F  +   +R ++ I    C
Sbjct: 511 MAYISSCCNPITYCFMNRRFRQAFLGVFSCYRNRMPICCCFC 552


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,153
Number of Sequences: 2352
Number of extensions: 14104
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)