Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20607
         (700 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g27035.1 68415.m03248 plastocyanin-like domain-containing pro...    28   5.2  
At2g02690.1 68415.m00208 hypothetical protein                          27   9.0  

>At2g27035.1 68415.m03248 plastocyanin-like domain-containing
           protein low similarity to SP:P80728 Mavicyanin
           {Cucurbita pepo}; contains Pfam profile PF02298:
           Plastocyanin-like domain
          Length = 163

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -1

Query: 451 YSGNELYWPFKF----LLQINKI*FSQCLDN 371
           YSG+ LY+ F      +LQ+NK  + QC+DN
Sbjct: 53  YSGDWLYFGFNRTRHNILQVNKSSYEQCVDN 83


>At2g02690.1 68415.m00208 hypothetical protein
          Length = 623

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +1

Query: 517 IC*SSCHGYHSCVI----VETLVFFKNVCMMYEMHETC 618
           +C SS  G H C+I     + ++++  +C +Y MH  C
Sbjct: 185 LCFSSLRGVHQCIICKNRADLIIYYCALCDIY-MHAVC 221


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,089,376
Number of Sequences: 28952
Number of extensions: 285477
Number of successful extensions: 513
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)