Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20606
(663 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 27 0.14
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 27 0.14
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 25 0.55
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.55
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 24 0.97
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 24 0.97
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 1.7
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 1.7
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 3.9
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 3.9
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 3.9
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 22 5.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 27.1 bits (57), Expect = 0.14
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 512 VSCWTPATVSPRPYHLRRIRTPSRHP 589
++CW+ + P PY + TPS+ P
Sbjct: 321 INCWSLTSSPPPPYQISAQPTPSQSP 346
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 27.1 bits (57), Expect = 0.14
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 206 HADHHTL-MAGPSDDRGEYGARSIISCETGLAHTGAIVY 93
H DH + P+DDRG A + + ET H A Y
Sbjct: 160 HVDHQPVPYLTPADDRGRVAAAAAMVAETASFHHDAAGY 198
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 25.0 bits (52), Expect = 0.55
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 171 RRSRGIRREEHHLLRNRP 118
+ G+R+ HHL++N+P
Sbjct: 78 KHKEGVRKVLHHLIKNKP 95
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 25.0 bits (52), Expect = 0.55
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 287 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 382
+VT+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 24.2 bits (50), Expect = 0.97
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 171 RRSRGIRREEHHLLRNRP 118
+ G+R+ HHL+ N+P
Sbjct: 78 KHKEGVRKVIHHLIENKP 95
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 24.2 bits (50), Expect = 0.97
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 171 RRSRGIRREEHHLLRNRP 118
+ G+R+ HHL+ N+P
Sbjct: 78 KHKEGVRKVIHHLIENKP 95
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 158 PLDRRKAPPSGCDGRHGTERLVRRRRGTEQKRF 256
P DR P+GC R G + R + +K F
Sbjct: 144 PFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEF 176
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 158 PLDRRKAPPSGCDGRHGTERLVRRRRGTEQKRF 256
P DR P+GC R G + R + +K F
Sbjct: 203 PFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEF 235
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 132 LRNRP-CTYRSHCLLPTRQLPRRT 64
++ +P C+ + C L TR+LP T
Sbjct: 477 IKGQPYCSLPNSCALTTRELPGET 500
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 132 LRNRP-CTYRSHCLLPTRQLPRRT 64
++ +P C+ + C L TR+LP T
Sbjct: 484 IKGQPYCSLPNSCALTTRELPGET 507
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 256 PDPQIPHRTRNRH 294
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.8 bits (44), Expect = 5.2
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -1
Query: 171 RRSRGIRREEHHLLRNRP 118
+ G+R+ HL++N+P
Sbjct: 77 KHKEGVRKVIRHLIKNKP 94
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 325 MPNLLHVIPVSDDSVFD 275
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 325 MPNLLHVIPVSDDSVFD 275
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 325 MPNLLHVIPVSDDSVFD 275
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 325 MPNLLHVIPVSDDSVFD 275
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,874
Number of Sequences: 336
Number of extensions: 3953
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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