Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20606
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 183 8e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 1e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 1e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 3e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 181 4e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 181 4e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 181 4e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 6e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 6e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 164 5e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 9e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 159 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 99 3e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 6e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.097
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 32 0.30
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 32 0.30
At1g16690.2 68414.m01999 transcription factor-related similar to... 31 0.52
At1g16690.1 68414.m01998 transcription factor-related similar to... 31 0.52
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.0
At1g69810.1 68414.m08032 WRKY family transcription factor 29 3.6
At5g64980.1 68418.m08173 expressed protein 28 6.4
At1g55890.1 68414.m06410 pentatricopeptide (PPR) repeat-containi... 28 6.4
At5g29020.1 68418.m03592 hypothetical protein 27 8.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.4
At4g01535.1 68417.m00199 hypothetical protein 27 8.4
At3g53320.1 68416.m05883 expressed protein 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 8e-47
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT YLMKILT+RGYS
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 201
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT +LMKILT+RGYS
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDHLMKILTERGYS 201
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT +LMKILT+RGYS
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDHLMKILTERGYS 201
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGY 656
IY+GYALPHAILRLDLAGRDLT LMKILT+RGY
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDSLMKILTERGY 200
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 110 bits (265), Expect = 7e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGY 656
IY+G++LPHAILRLDLAGRDLT YLMKILT+RGY
Sbjct: 167 IYEGFSLPHAILRLDLAGRDLTDYLMKILTERGY 200
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 181 bits (440), Expect = 4e-46
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 110 bits (265), Expect = 7e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGY 656
IY+G++LPHAILRLDLAGRDLT YLMKILT+RGY
Sbjct: 167 IYEGFSLPHAILRLDLAGRDLTDYLMKILTERGY 200
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 110 bits (265), Expect = 7e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGY 656
IY+G++LPHAILRLDLAGRDLT YLMKILT+RGY
Sbjct: 167 IYEGFSLPHAILRLDLAGRDLTDYLMKILTERGY 200
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT LMKILT+RGYS
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDALMKILTERGYS 201
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRT 150
Score = 115 bits (276), Expect = 3e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 252 G 254
G
Sbjct: 65 G 65
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT LMKILT+RGYS
Sbjct: 167 IYEGYALPHAILRLDLAGRDLTDALMKILTERGYS 201
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 164 bits (398), Expect = 5e-41
Identities = 70/88 (79%), Positives = 81/88 (92%)
Frame = +2
Query: 245 QKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 424
++ L+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 425 QIMFETFNTPAMYVAIQAVLSLYASGRT 508
QIMFE+F P+MY+ IQAVLSLY+SGRT
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRT 151
Score = 107 bits (256), Expect = 9e-24
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 252 G 254
G
Sbjct: 66 G 66
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+GYALPHAILRLDLAGRDLT YL KI+ +RGY+
Sbjct: 168 IYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYT 202
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
GIVLDSGDGVS TVP
Sbjct: 153 GIVLDSGDGVSHTVP 167
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (388), Expect = 9e-40
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = +2
Query: 194 DGRHGTERLVRRRRGTEQKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 373
DG + E V G + LTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPV
Sbjct: 36 DGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPV 94
Query: 374 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 508
LLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRT
Sbjct: 95 LLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRT 139
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
+Y+GYALPH ILRLDL GRDLT YL++I+T+RGY+
Sbjct: 156 VYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYT 190
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3
Query: 87 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 159 bits (386), Expect = 2e-39
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +2
Query: 257 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 436
LTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 437 ETFNTPAMYVAIQAVLSLYASGRT 508
ETF P+MY+ +QA LSL+ASGRT
Sbjct: 82 ETFAVPSMYIGMQAALSLHASGRT 105
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYS 659
IY+G ALPHAILRLDLAGR LT YLMKI+ +RGY+
Sbjct: 122 IYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYT 156
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 195 MVGMGQKDSYVGDEAQSKRG 254
MVGM + D +VGD+A+++ G
Sbjct: 1 MVGMNENDLFVGDDAEARSG 20
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
G VLDSGDGVS VP
Sbjct: 107 GTVLDSGDGVSYIVP 121
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 112 bits (270), Expect = 2e-25
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +2
Query: 239 TEQKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 418
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 419 MTQIMFETFNTPAMYVAIQAVLSLYASG 502
M + MFE +N +++ IQAVL+LYA G
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQG 147
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 87 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 251
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
Score = 44.0 bits (99), Expect = 9e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYSV 662
+ DGY+ PH R+++AGR +T YL+ +L+ RGY++
Sbjct: 166 VVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAM 201
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 511 GIVLDSGDGVSQTVP 555
G+V+DSGDGV+ VP
Sbjct: 151 GLVIDSGDGVTHVVP 165
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/105 (45%), Positives = 64/105 (60%)
Frame = +2
Query: 206 GTERLVRRRRGTEQKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 385
G E L + R + L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 71 GDEALAKSRSSSTHN----LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 386 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSC 520
+PL P +RE +I+FETFN P +Y+A+ +VL+L A+G T C
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 84 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 170
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/36 (25%), Positives = 24/36 (66%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYSV 662
+ +GY + I + +AG+D+T ++ +++ +RG ++
Sbjct: 189 VAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENI 224
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = +2
Query: 272 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 451
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 452 PAMYVAIQAVLSLYASGR 505
PA+++A VL+ +A+GR
Sbjct: 154 PALFMAKNPVLTSFATGR 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 173
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 448
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 449 TPAMYVAIQAVLSLYASGR 505
Y + QAVLSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 84 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 176
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2
Query: 272 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 418
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +3
Query: 72 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 251
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 252 G 254
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 263 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 442
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 443 FNTPAMYVA-IQAVLSLYASGRTPVS 517
F ++Y+A Q+++ LY + R P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 87 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 179
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 555 IYDGYALPHAILRLDLAGRDLTGYLMKILTDRGYSV 662
+ + L HAI R+DL G+ T YL ++++ R +V
Sbjct: 169 VLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINV 204
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 272 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 448
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 449 TPAMYVAIQAVLS 487
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 87 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 233
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.097
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 208 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 71
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Frame = +2
Query: 329 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 478
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 479 VLSLYASGRT 508
VL+LYA+ RT
Sbjct: 241 VLALYAARRT 250
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Frame = +2
Query: 329 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 478
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 479 VLSLYASGRT 508
VL+LYA+ RT
Sbjct: 241 VLALYAARRT 250
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 242 EQKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 418
E ++L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 242 EQKRFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 418
E ++L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 449 TPAMYVAIQAVLSLYASGRTPVSCWTPATVSPRPYHLRRIRTPSRHPASGLGRSRPHRLP 628
TP M+ + S+ +S R P S P+ ++PR ++ P+ P G+ P
Sbjct: 220 TPYMHGSNIFAGSIESSSRNPTSFMYPSQLNPRDHYYSHHHHPAPPPVQGMRGQNATLYP 279
Query: 629 H 631
H
Sbjct: 280 H 280
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 184 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 98
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 373 DGMFLGGDTELIVEGMMPNLLHVIPVS 293
DG+ +GG E + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g69810.1 68414.m08032 WRKY family transcription factor
Length = 387
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 458 MYVAIQAVLSLYASGRTPVSCWTPATVSPR-PYHLRRIRTPSRHPASGLGRSR---PHRL 625
M A SL SG + S T A++S P+H I T + HP L +R P++L
Sbjct: 270 MAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPNYPNQL 329
Query: 626 PHEDP 640
P + P
Sbjct: 330 PDDYP 334
>At5g64980.1 68418.m08173 expressed protein
Length = 344
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 524 TPATVSPRPYHLRRIRTPSRHPASGLG 604
TP P Y + ++ PSR PA+GLG
Sbjct: 103 TPDVKPPLDYVVEKVVLPSRGPATGLG 129
>At1g55890.1 68414.m06410 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 398
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 510 GVRPDAYSESTAWMATYMAGVLNVSNMIW--VIFSLLALGLRGASVRRTGCSSGATRSSL 337
G++PD + +T +++Y+ G + IW ++ +A+ +R + R G ++ A L
Sbjct: 210 GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKEL 269
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 462 TSPSKPCSRCTRPVVPRY-RAGLRRRCLPDR 551
++P+KPC T PV P Y G R+R P +
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPK 56
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 184 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 62
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 20 LRTCHLFNNTILIQDVRRGSCRVGSRQWL 106
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At3g53320.1 68416.m05883 expressed protein
Length = 553
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/72 (23%), Positives = 27/72 (37%)
Frame = +2
Query: 401 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVSPRPYHLRRIRTPS 580
K+N + T + ++ A Q S R P P + +P R + T
Sbjct: 183 KSNVLRATDVAISPTSSTVDVTATQGKTKSKGSPRNPSRVQGPGKATKQPVATRGLSTSI 242
Query: 581 RHPASGLGRSRP 616
P +GL + RP
Sbjct: 243 SKPPNGLSKVRP 254
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,872,249
Number of Sequences: 28952
Number of extensions: 373865
Number of successful extensions: 1275
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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