Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20605
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 164 2e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 151 2e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 145 8e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 1e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 131 2e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 127 3e-28
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 111 2e-23
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 107 2e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 1e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 94 3e-18
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 93 4e-18
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 93 6e-18
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 92 1e-17
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 83 6e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 82 1e-14
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 82 1e-14
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 79 8e-14
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 77 6e-13
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 74 4e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 73 5e-12
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 73 5e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 9e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 1e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 72 2e-11
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 71 2e-11
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 71 3e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 71 4e-11
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 71 4e-11
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 69 1e-10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 68 3e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 67 3e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 66 1e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 65 2e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 64 4e-09
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 58 2e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 57 4e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 8e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 50 7e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 9e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.004
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 44 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.008
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.015
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.025
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.025
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 41 0.034
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.078
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.14
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.24
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.31
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.31
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 38 0.31
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.41
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.55
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 36 0.72
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.96
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.3
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 2.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.2
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.2
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 35 2.2
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.9
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 34 3.9
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 3.9
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.7
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 33 8.9
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 8.9
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 8.9
UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 164 bits (398), Expect = 2e-39
Identities = 79/88 (89%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 439 RGAIILAKLSVLPVRRGYWGNKI-ESHT 519
RGAIILAKLS++PVRRGYWGNKI + HT
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 125 bits (302), Expect = 9e-28
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
KPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGN
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGN 235
Query: 690 FAK 698
FAK
Sbjct: 236 FAK 238
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 151 bits (366), Expect = 2e-35
Identities = 74/88 (84%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 439 RGAIILAKLSVLPVRRGYWGNKI-ESHT 519
RGAIILAKLS++PV RGYWGNKI + HT
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAP 581
KPHTVPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 167 VPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
+PVTKLG L+ + KI LE IYLFSLPIK+S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 145 bits (352), Expect = 8e-34
Identities = 66/106 (62%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +1
Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
K + E L + ++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI-ESHT 519
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG + + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 109 bits (262), Expect = 6e-23
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = +3
Query: 513 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 692
PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TLGNF
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Query: 693 AK 698
K
Sbjct: 210 VK 211
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKE 64
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (318), Expect = 1e-29
Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +1
Query: 223 EHLLVF-FTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 399
EH+ +F + +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 400 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI-ESHT 519
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+ E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLGN
Sbjct: 166 EPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGN 225
Query: 690 FAK 698
K
Sbjct: 226 SVK 228
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 149 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 131 bits (316), Expect = 2e-29
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 475 PVRRGYWGNKI 507
P+R+GYWGNKI
Sbjct: 108 PLRQGYWGNKI 118
Score = 112 bits (270), Expect = 7e-24
Identities = 51/63 (80%), Positives = 55/63 (87%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
KP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LGN
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 690 FAK 698
FAK
Sbjct: 180 FAK 182
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 127 bits (306), Expect = 3e-28
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ F+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 430 TAIRGAIILAKLSVLPVRRGYWGNKI 507
AIR II+AKLSV+P+RRGYWG +
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNL 148
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 690 FAK 698
K
Sbjct: 210 TLK 212
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 152 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+K+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKE 65
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 111 bits (266), Expect = 2e-23
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = +3
Query: 495 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
G + RKPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHT 170
Query: 675 GTLGNFAK 698
T G +
Sbjct: 171 ATWGTLPR 178
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
Frame = +1
Query: 346 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI-ESHT 519
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 152 DQKEWVPVTKLGRLVREGKI 211
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 107 bits (258), Expect = 2e-22
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +3
Query: 501 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
Q R KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 681 LGNFAK 698
LGNFAK
Sbjct: 175 LGNFAK 180
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 360
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (251), Expect = 1e-21
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 439 RGAIILAKLSVLPVRRGYW-GNKIESHTPS 525
RGAI AK ++ PVR G W G + + HT S
Sbjct: 113 RGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 86.6 bits (205), Expect = 5e-16
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
KPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T N
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 690 FAK 698
FAK
Sbjct: 197 FAK 199
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++++ EW+P T +GRLV+ KI LE I+ FS I++
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 402
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 93.5 bits (222), Expect = 4e-18
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = +3
Query: 531 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNFAK
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAK 179
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 360
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 93.1 bits (221), Expect = 6e-18
Identities = 47/74 (63%), Positives = 53/74 (71%)
Frame = +3
Query: 477 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 656
S ++ LG + K H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 657 SARGSTGTLGNFAK 698
SARG T +L FA+
Sbjct: 61 SARGCTASLDYFAQ 74
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
+PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGN
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGN 209
Query: 690 FAK 698
F K
Sbjct: 210 FTK 212
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +1
Query: 316 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 495
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 496 GNKIESH 516
G ++E H
Sbjct: 148 GKRLEPH 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 155 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSLISSSARP 289
+ +W+P+TKLG LV+E KI LE IY FSL ++ RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 83.4 bits (197), Expect = 5e-15
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = -3
Query: 525 GRCVAF-DLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETC 349
G V F DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 348 ALSGTCLFLYRHDL*NLIIQGRAEEEINDLESLIGK 241
L+GT L L HDL + ++Q A+EEI+DLE G+
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 573 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAK
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 42
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3
Query: 495 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 668
G + KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 73.7 bits (173), Expect = 4e-12
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTI 130
Query: 439 RGAIILAKLSVLPVRRGYWGNKI-ESHT 519
+ IIL KL ++PV RGY G+K + HT
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 170 PVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
P +KLG LV++ +I L IYLFSLPIK++
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 399
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 49.2 bits (112), Expect = 1e-04
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Frame = +2
Query: 206 KIDKLESIYLFSLPIKDSRSL---ISSSARP*MMRF*--RSCLYRNKHVPDSAHVS-RHL 367
KI LE IYLFSLPIK+S + + +S + +++ R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 368 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRSKATHRPLQGHRQV 547
A +L R+ P +L C ++ + + G +A HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 548 WFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGK 688
C +W+ + + + EA+ D W LLHLS + H G+
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQ 162
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF K
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 247 NQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 426
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 427 ATAI 438
ATAI
Sbjct: 143 ATAI 146
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3
Query: 507 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 686
R+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTV 195
Query: 687 NFAK 698
NFAK
Sbjct: 196 NFAK 199
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 426
EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 427 ATAIRGAIILAKLSVLPVRRG 489
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 161 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
EW P TKLG +V+EG+I + I+ IK+
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKE 46
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/65 (52%), Positives = 51/65 (78%)
Frame = +3
Query: 504 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 683
D+K H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 684 GNFAK 698
+ +K
Sbjct: 221 NSTSK 225
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 463 LSVLPVRRG 489
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/59 (64%), Positives = 41/59 (69%)
Frame = +3
Query: 522 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T TL NF+K
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNFSK 117
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 322 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 501
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L + R
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSRSTLVQ 60
Query: 502 -KIESHTPSL 528
K+ SH S+
Sbjct: 61 YKVTSHYGSV 70
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ ++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 430 TAIR 441
AI+
Sbjct: 152 GAIQ 155
Score = 55.2 bits (127), Expect = 1e-06
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Frame = +2
Query: 155 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD----SRSLISSSARP*MMRF*RSCLY 322
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK+ L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 323 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 490
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 491 TGVTRSKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLH 655
G TH P+Q R+ S S YW E ++GW LLH
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 72.5 bits (170), Expect = 9e-12
Identities = 36/104 (34%), Positives = 63/104 (60%)
Frame = +1
Query: 235 VFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 414
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 415 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIESHTPSLARSPAS 546
S + I+ A+ AKL++ +RRGYW +IE P+ + S
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW--EIEEGKPNTIKYKTS 191
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/66 (40%), Positives = 45/66 (68%)
Frame = +3
Query: 501 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
++ KP+T+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T +
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKS 238
Query: 681 LGNFAK 698
N K
Sbjct: 239 SFNTIK 244
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 439 RGAIILAKLSVLPVRRG 489
R AI AKLS++ VR G
Sbjct: 107 RKAIAHAKLSLIKVRVG 123
Score = 69.7 bits (163), Expect = 6e-11
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 513 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 692
PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
Query: 693 AK 698
A+
Sbjct: 194 AE 195
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ I
Sbjct: 24 EIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTI 82
Query: 439 RGAIILAKLSVLPVRRG 489
R AI AKL+++PV RG
Sbjct: 83 RKAIDKAKLNMIPVMRG 99
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
+VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+A+
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINYAQ 171
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Query: 690 FAK 698
K
Sbjct: 136 VIK 138
Score = 67.3 bits (157), Expect = 3e-10
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 268 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 448 IILAKLSVLPVRRGYWGNKI-ESHTPS 525
IIL + S+ G+ GNKI + HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 690 FAK 698
F +
Sbjct: 190 FVR 192
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+EW P T +G LV+EGKI ++ ++ +LPI +
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 70.5 bits (165), Expect = 4e-11
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = -3
Query: 498 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 319
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 318 RHDL*NLIIQGRAEEEINDLESL 250
R D+ N I+Q ++ +NDLE L
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/65 (49%), Positives = 49/65 (75%)
Frame = +3
Query: 504 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 683
D+K H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPTT 201
Query: 684 GNFAK 698
+ +K
Sbjct: 202 NSTSK 206
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 463 LSVLPVRRG 489
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
+PHTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T N
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVN 183
Query: 690 FAK 698
FAK
Sbjct: 184 FAK 186
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI +AKL+++ V RG
Sbjct: 98 QKAIDIAKLNIIDVSRG 114
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 164 WVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
W P T+LG+ V EG+ID ++ LP+K+S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 430 TAIRGAIILAKLSV 471
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 67.3 bits (157), Expect = 3e-10
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 430 TAIRGAIILAKL-SVLPVRRGYWGNKIESHTPSLARSPASV 549
TA+ + + L S LP R Y GN I T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +3
Query: 507 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 686
RKP T PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLG
Sbjct: 104 RKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLG 158
Query: 687 NFAK 698
N AK
Sbjct: 159 NIAK 162
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/80 (36%), Positives = 52/80 (65%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ ++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 430 TAIRGAIILAKLSVLPVRRG 489
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 690 FA 695
+A
Sbjct: 182 YA 183
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+EW P T+LGRLV G+I + LP+K+
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKE 35
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 697 LAKFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTV 518
LAK PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +
Sbjct: 10 LAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-L 68
Query: 517 CG 512
CG
Sbjct: 69 CG 70
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI +AKL+++ V RG
Sbjct: 149 QKAIDVAKLNIIEVDRG 165
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +3
Query: 531 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N AK
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLAK 237
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 253
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 513 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T N
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMN 196
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 322 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 489
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.41
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESI 229
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 430 TAIRGAIIL 456
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 460 KLSVL--PVRRGY---WGNKIESHTPSLARSPASV 549
K + + P+ + Y +E S+ PASV
Sbjct: 128 KKTAITVPITKDYSLPHRLDVEWGAASVMMKPASV 162
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 138 KDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 54.4 bits (125), Expect = 3e-06
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 439 RGAIILAKLSVLPVRRGYWGNKI-ESHT 519
+ AI L + + GY GNKI HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 513 PHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 641
PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 469 VLPV 480
++ V
Sbjct: 72 LISV 75
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 466 SVLPVRR 486
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +3
Query: 477 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 656
++ L+ + K ++ V G+ G+ V L+PAP GTGI++ + ++++AG D YT
Sbjct: 105 ANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYT 164
Query: 657 SARGSTGTL 683
+RG+ +
Sbjct: 165 KSRGANAPM 173
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 268 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 448 IILAKLSVLPV 480
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 37.5 bits (83), Expect = 0.31
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +3
Query: 585 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 463 LSVLPV 480
++ +
Sbjct: 73 KQLVRI 78
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 671
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 49.6 bits (113), Expect = 7e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 475 PV 480
+
Sbjct: 71 KI 72
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 402
+ ++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 39.1 bits (87), Expect = 0.10
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 170 PVTKLGRLVREGKIDKLESIYLFSLPIKD 256
PVTKLGRLV++GK+ ++ I+ F + IK+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKE 64
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 469 VLPVR 483
+ V+
Sbjct: 138 MYKVK 142
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 683
K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 475 --PVRRGYWGNKI--ESHTPSLARSPA 543
PV G ++I E+ T + PA
Sbjct: 79 TVPVENGTIPHEIVGENSTSRVLLKPA 105
Score = 39.5 bits (88), Expect = 0.078
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 475 PV 480
V
Sbjct: 77 EV 78
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 683
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 274 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 453
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 454 LAKLSVLPV 480
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 39.5 bits (88), Expect = 0.078
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 668
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 477 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 656
S+K+ L + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T
Sbjct: 85 SAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLT 144
Query: 657 SARGST 674
+ GS+
Sbjct: 145 KSWGSS 150
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 292 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 471
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 472 LPV 480
+ +
Sbjct: 91 VKI 93
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 475 PV 480
V
Sbjct: 209 QV 210
Score = 40.7 bits (91), Expect = 0.034
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
K T P + G G+ V L PA GTG+++ + +L+MAGV++ GS L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 483 KRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 662
K L+ K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 663 RGSTGTLGN 689
GS L N
Sbjct: 144 LGSDNLLNN 152
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 475 PV 480
V
Sbjct: 246 TV 247
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
T P + G G+ V L PA GTG+++ + +L+MAGV++ S L N
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN 310
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 460 KLSVL--PVRRG 489
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 460 KLSVLPVRR 486
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 468
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 469 VLPVRRG 489
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 469 VLPV 480
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 475 PVRRGYWGNKIES--HTPSLARSPASVVL 555
V NKI S H S + A+V L
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANVFL 152
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
K +++P ++G G+ V L PA GTG+++ + +L++AG+++ + GS L N
Sbjct: 133 KINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPLNN 192
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 43.6 bits (98), Expect = 0.005
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 164 WVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
W PVTKLGRLV++GK+ ++ I+ F + IK+
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKE 65
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 475 PV 480
V
Sbjct: 104 RV 105
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 683
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS +
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 531 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 668
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 475 PV 480
V
Sbjct: 79 EV 80
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 689
K +++ G G V + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.9 bits (79), Expect = 0.96
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 40.7 bits (91), Expect = 0.034
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++ N AK
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGASNA-ANVAK 142
Score = 35.9 bits (79), Expect = 0.96
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 292 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.078
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 37.5 bits (83), Expect = 0.31
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 154 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRFEIIDFFLGPS--LNDEVLKIMPVQK 327
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 328 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 480
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 37.9 bits (84), Expect = 0.24
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 507 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
R+ T+ K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 77 REGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 486
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 36.3 bits (80), Expect = 0.72
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 510 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 469 VLPVRR 486
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = -3
Query: 255 SLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSF 157
SL GKE K + S + I P+ T PSLVTGTH F
Sbjct: 19 SLTGKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 450 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 352
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.55
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 469 VLPV 480
++ V
Sbjct: 81 MVRV 84
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 36.3 bits (80), Expect = 0.72
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 582 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 698
RG + + + KKLL +A +QDCY AR + LGN+AK
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAK 43
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.96
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 301 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 480
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 319 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 486
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 466 SVLPVRR 486
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 516 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 671
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.2
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 277 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 456
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 457 AKLSVL 474
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 274 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 438
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 507 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
R+ T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 77 REGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 466 SVLPVRR 486
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 33.9 bits (74), Expect = 3.9
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = -3
Query: 588 YHEGQESAGLLQNHTCR*PCKGRCVAF--DLVTPVTSSNW*NRQLSKDNSASNGSGDFLA 415
++E + ++ NH CR +G + F D TP T N+++ SA+ +FL
Sbjct: 635 FNENKTMKKVVFNHWCR--FRGGILKFPKDKQTPNTY----NKEIGSLFSANGSIKNFLM 688
Query: 414 ALHTQTNMTV-VVANGNK---CLETCALSGTCLF-LYRHDL*NLIIQ 289
T T + ++++GNK C ET A+ TC F Y DL LI Q
Sbjct: 689 WSSTTTQVIEEILSSGNKTITCFETSAIDNTCNFDKYLLDLNRLINQ 735
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 519 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 674
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 301 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 176 TKLGRLVREGKIDKLESIYLFSLPIKDSRSLISSSA 283
TK+GRL I+ ++ +YLF PI ++R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -3
Query: 360 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEINDLESL 250
LE+CAL TC+ +Y HD+ ++ + +A+E+++D L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 8.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 173 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 15
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1313
Score = 32.7 bits (71), Expect = 8.9
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = -1
Query: 656 GVAVLYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSILLPQ*PLRT 477
G +Y +HL R+ SS +R P C ++ AG + +S +P P
Sbjct: 374 GNGTIYHAHLAASTRSSLAQPSSYSRPARSPACSPSSAAGAASAAPTPISNSVPAAPQSI 433
Query: 476 GKTDNLARIIAPRMAVATSLLHFTPKPI*PLLSPMATN 363
+ N + + V SL F P PLLSP+AT+
Sbjct: 434 RNSRNASNLNLAINHVRKSL--FIGPPPSPLLSPVATS 469
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,633,077
Number of Sequences: 1657284
Number of extensions: 15290994
Number of successful extensions: 45330
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 42693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45173
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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