Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20604
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7S0G2 Cluster: Predicted protein; n=2; Nematostella ve... 55 2e-06
UniRef50_UPI000069F752 Cluster: CDNA FLJ12688 fis, clone NT2RM40... 50 7e-05
UniRef50_Q4SRQ7 Cluster: Chromosome undetermined SCAF14503, whol... 42 0.015
UniRef50_UPI0000660EB3 Cluster: CDNA FLJ12688 fis, clone NT2RM40... 42 0.019
UniRef50_Q1LUE9 Cluster: Novel protein; n=2; Danio rerio|Rep: No... 41 0.034
UniRef50_Q9C0B7 Cluster: Transmembrane and coiled-coil domain-co... 39 0.10
UniRef50_UPI0000DA4294 Cluster: PREDICTED: hypothetical protein;... 38 0.32
UniRef50_UPI0000DC0BE1 Cluster: transmembrane and coiled-coil do... 38 0.32
UniRef50_Q1G391 Cluster: F-box protein At4g00893; n=4; Arabidops... 38 0.32
UniRef50_Q4HF30 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q9K7Z0 Cluster: BH3217 protein; n=1; Bacillus haloduran... 34 2.9
UniRef50_A5ZAA6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_A2FP12 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_A3KP53 Cluster: LOC563708 protein; n=4; Danio rerio|Rep... 33 5.1
UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY0449... 33 5.1
UniRef50_Q3E9K6 Cluster: Uncharacterized protein At5g06440.2; n=... 33 6.8
UniRef50_Q8SCQ3 Cluster: PHIKZ259; n=1; Pseudomonas phage phiKZ|... 33 6.8
>UniRef50_A7S0G2 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 913
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 254 LQLVASLGVSTCLIPGLGISISKRCSFSNTIPSFNLSQEQKYSILVDCTDFIHRSYEIPV 433
+Q V SLG+ L+PG+GI + KR F I S +L +K L C + + P
Sbjct: 21 VQFVISLGLCPYLLPGIGIPLEKRTGFGELIKSGSLF-VRKERHLYKCVWTLLECTKQPT 79
Query: 434 YKNIIMTLHLSDYLAALIQLSFAP 505
++I++ HL D L+ LIQL FAP
Sbjct: 80 LGSVILSRHLGDVLSGLIQLVFAP 103
>UniRef50_UPI000069F752 Cluster: CDNA FLJ12688 fis, clone
NT2RM4002534.; n=1; Xenopus tropicalis|Rep: CDNA
FLJ12688 fis, clone NT2RM4002534. - Xenopus tropicalis
Length = 1027
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +2
Query: 251 MLQLVASLGVSTCLIPGLGISISKRCSFSNTIPSFNLSQE---QKYSILVDCTDFIHRSY 421
+LQ V SLG+ L+PG+G+ I +R F + S + + + + C+ + S+
Sbjct: 120 VLQFVISLGICPYLLPGVGLPIQQRSEFGALVRSLITCETPTIRTRRLFISCSALMEVSH 179
Query: 422 EIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQEHIRTL 535
++ + ++++T +L D +A L QL F P R T+
Sbjct: 180 QLSL-GSLLLTHYLGDLMAGLCQLGFCPSRKNAEQNTI 216
>UniRef50_Q4SRQ7 Cluster: Chromosome undetermined SCAF14503, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14503,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1156
Score = 41.9 bits (94), Expect = 0.015
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 LQLVASLGVSTCLIPGLGISISKRCSFSNTIPSF--NLSQEQKYSILVDCTDFIHRSYEI 427
LQ V SLG+ L PG+G ++ R +F ++ +E + + T + + E+
Sbjct: 133 LQFVVSLGLCPYLAPGVGAPLAHRSAFGASVQKLCCGRVREPRRRLFTTATVLLEFA-EL 191
Query: 428 PVYKNIIMTLHLSDYLAALIQLSF 499
P + T HL+D +AAL QL +
Sbjct: 192 PSLAAAVFTRHLNDLMAALCQLGY 215
>UniRef50_UPI0000660EB3 Cluster: CDNA FLJ12688 fis, clone
NT2RM4002534.; n=1; Takifugu rubripes|Rep: CDNA FLJ12688
fis, clone NT2RM4002534. - Takifugu rubripes
Length = 979
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 254 LQLVASLGVSTCLIPGLGISISKRCSFSNTIPSF-NLSQEQKYSILVDCTDFIHRSYEIP 430
LQ V SLG+ L PG+G+ ++ R +F + + + ++ L T + + +P
Sbjct: 140 LQFVVSLGLCPYLAPGVGLPLAHRSAFGAKVQKLCSRTVQEPRRRLFTTTTVLLKVAALP 199
Query: 431 VYKNIIMTLHLSDYLAALIQLSF 499
++ HL+D +AAL QL +
Sbjct: 200 SLAAVVFMQHLNDLMAALCQLGY 222
>UniRef50_Q1LUE9 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1047
Score = 40.7 bits (91), Expect = 0.034
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 MLQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSILVDCTDFIHRSY 421
+LQ V +LG+ L PG+G+++ R +F + +++ + +LV T+ +
Sbjct: 118 VLQFVVTLGLCPYLAPGVGVALGLRSAFGAAVEGAVRLDVAPAGERRLLVT-TNVLLEVS 176
Query: 422 EIPVYKNIIMTLHLSDYLAALIQLSFAPLR 511
+ + T HL D +AAL QL++ P R
Sbjct: 177 ALSSLATPVFTRHLGDIMAALCQLAYRPQR 206
>UniRef50_Q9C0B7 Cluster: Transmembrane and coiled-coil
domain-containing protein 7; n=21; Amniota|Rep:
Transmembrane and coiled-coil domain-containing protein
7 - Homo sapiens (Human)
Length = 1094
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 251 MLQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSILVDCTDFIHRSY 421
+LQ V +LG+ L+PG+G+ + R F + F+ + + + C ++ +
Sbjct: 148 VLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQDVVCFDAAPDATRRLYTSCKALLNVAQ 207
Query: 422 EIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQ 517
+ ++I H D A L QL F P + +
Sbjct: 208 HTSL-GSLIFCHHFGDIAAGLCQLGFCPTKRK 238
>UniRef50_UPI0000DA4294 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 973
Score = 37.5 bits (83), Expect = 0.32
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 245 KNMLQLVASLGVSTCLIPGLGISISKRCSFSNTIPSFNLSQEQKYSI--LVDCTDFIHRS 418
+++LQ V +LGV L+PG+G+ + R F + + ++ L C +
Sbjct: 149 QSVLQFVVTLGVCPYLMPGVGVPLRDRTEFGAVVQGIVRLEAAPHATRRLYICCRVLLDL 208
Query: 419 YEIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQ 517
+ ++I H D A L QL F P + +
Sbjct: 209 AQHASLGSLIFCRHFGDIAAGLCQLGFCPTKRK 241
>UniRef50_UPI0000DC0BE1 Cluster: transmembrane and coiled-coil
domains 7; n=1; Rattus norvegicus|Rep: transmembrane and
coiled-coil domains 7 - Rattus norvegicus
Length = 1075
Score = 37.5 bits (83), Expect = 0.32
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 245 KNMLQLVASLGVSTCLIPGLGISISKRCSFSNTIPSFNLSQEQKYSI--LVDCTDFIHRS 418
+++LQ V +LGV L+PG+G+ + R F + + ++ L C +
Sbjct: 149 QSVLQFVVTLGVCPYLMPGVGVPLRDRTEFGAVVQGIVRLEAAPHATRRLYICCRVLLDL 208
Query: 419 YEIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQ 517
+ ++I H D A L QL F P + +
Sbjct: 209 AQHASLGSLIFCRHFGDIAAGLCQLGFCPTKRK 241
>UniRef50_Q1G391 Cluster: F-box protein At4g00893; n=4; Arabidopsis
thaliana|Rep: F-box protein At4g00893 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 388
Score = 37.5 bits (83), Expect = 0.32
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Frame = +1
Query: 262 GSIAWCFNMPYTWTRNFYFKKMLVFKYNSFL*FKSRTKIFNIS*LYRFYSQVIRNT--CL 435
G+ W N T+ R FY + LV++ + F F + +++ YR +S + + C
Sbjct: 199 GATKWITNDFPTFLRLFYMQSNLVYRRDRFYCFNAEGTLYSFEPSYREWSYICADKLRCP 258
Query: 436 *KHNNDLTF----V*LLSSSNTIVV---CSVEKPGTYKDFVMT-EEMYKTFTNDRQKYLK 591
H N + V L+ + V CS EKP YK F M +E+ +T + ++
Sbjct: 259 YVHENQYMWCGKAVFLVEKKGELFVMFTCSNEKPMVYKLFSMKWKELSRTTLDGMTFFVS 318
Query: 592 IYDN 603
Y++
Sbjct: 319 FYNS 322
>UniRef50_Q4HF30 Cluster: Putative uncharacterized protein; n=1;
Campylobacter coli RM2228|Rep: Putative uncharacterized
protein - Campylobacter coli RM2228
Length = 315
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 78 NEHTKNLDKTKGEPDFDNYVLLKDLLHKIFEGIDELATEIR-KDDTLLI 221
NE+ KNL K + E +F N++L+ +KI + ++ L T ++ K + L I
Sbjct: 252 NENIKNLPKEENEKEFSNFILVNIYWNKIRKDLENLKTTLKNKQEDLFI 300
>UniRef50_Q9K7Z0 Cluster: BH3217 protein; n=1; Bacillus
halodurans|Rep: BH3217 protein - Bacillus halodurans
Length = 240
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 78 NEHTKNLD--KTKGEPDFDNYVLLKDLLHKIFEGIDELATEIRKDDTLLI 221
N HT+ LD +PD + YV + D+ H+IF ID L+ +D L I
Sbjct: 131 NPHTQQLDIEPLSYQPDLNGYVWVNDVTHEIFVEIDGLSELQNQDHQLWI 180
>UniRef50_A5ZAA6 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 2004
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 397 YRFYSQVIRNTCL*KHNNDLTFV*LLSSSNTIVVCSVEKPGTYKDFVMTEEMYKTFTNDR 576
Y Y+ ++ + K N+D +F + S S T+ V S + TY D + E K T+++
Sbjct: 1718 YHDYADYSYDSSVLKQNDDGSFTAIQSGSTTVTV-SCDGKTTYIDVQVNELPVKEITSEQ 1776
Query: 577 QKYLKIYDNLVSTCFQ 624
KY N+V+ Q
Sbjct: 1777 NKYSGTVGNIVTIKLQ 1792
>UniRef50_A2FP12 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 851
Score = 33.9 bits (74), Expect = 3.9
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 287 CLIPGLGISISKRCSFSNTIPSFNLSQEQKYSILVDCTDFIHRSYEIP------VYKNII 448
CL G G++ + S I SF+ QKY LV FI YE+ V +N+
Sbjct: 702 CLFVGKGLTQESKISLLQMINSFDEKLNQKYFDLVKLAAFIQNEYELDAATIMNVMENVQ 761
Query: 449 MTLHLSDYLAALIQLSFAPLRNQEHIRTLS*LKK 550
+ Y ALI +F + + + + ++ L K
Sbjct: 762 KGKYPYTYERALISTAFDKINDNQLCQIMNILIK 795
>UniRef50_A3KP53 Cluster: LOC563708 protein; n=4; Danio rerio|Rep:
LOC563708 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 410
Score = 33.5 bits (73), Expect = 5.1
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = +3
Query: 51 PNTFISMFINEHTKNLDKTKGEPDFDNYVLLKDLLHKIFEGIDELATEIRKDDTLL---I 221
PN I + H K L KG+ + +N +L K E L + D+ LL
Sbjct: 42 PNELIQQWSPPHKKALTTAKGKENEENLFVLARRPRKRRESSANLCWDSLPDELLLGIFS 101
Query: 222 SVKQQKVLRT---CSSW*HRLVFQHALY 296
+ Q +LRT C W HRL F +L+
Sbjct: 102 RLSLQDLLRTSRVCKRW-HRLAFDESLW 128
>UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY04499;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY04499 - Plasmodium yoelii
yoelii
Length = 1784
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 12 IFTKLENFQQKDGPNTFISMFINEHTKNLDKTKGEPDFDNYVLLKDLLHKIFEGIDEL 185
IF LE + N ++F +H K LD K D Y+L+K+ + G+D L
Sbjct: 1502 IFDCLEYYSYNKKSNIISALFFEKHIKLLDILKNLNSKDEYLLIKNKNSEYCSGVDNL 1559
>UniRef50_Q3E9K6 Cluster: Uncharacterized protein At5g06440.2; n=3;
Arabidopsis thaliana|Rep: Uncharacterized protein
At5g06440.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 479
Score = 33.1 bits (72), Expect = 6.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 96 LDKTKGEPDFDNYVLLKDLLHKIFEGIDELATEIRKDDTLLISVKQQKVLRT 251
LDKT P+ N+ LK LL E DE + R DD + K + V T
Sbjct: 14 LDKTLSSPELTNHETLKSLLRNQLEECDENILDKRTDDVSKLLSKLRSVSMT 65
>UniRef50_Q8SCQ3 Cluster: PHIKZ259; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ259 - Pseudomonas phage phiKZ
Length = 144
Score = 33.1 bits (72), Expect = 6.8
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 42 KDGPNTFISMFINEHTKNLDKTKGEPDFDNYVLLKDLLHKIFEGIDELATEIRKDDTLLI 221
+DG T S +N +D TKG+P+ D Y+ + D K +DE+ T + + I
Sbjct: 50 EDGTLTTFSPKLNNRLI-IDLTKGQPNKDFYISVLDNTLKFHHTVDEIITANKWEALFKI 108
Query: 222 SVKQQKV 242
S+ ++ V
Sbjct: 109 SITKEDV 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,176,322
Number of Sequences: 1657284
Number of extensions: 11921082
Number of successful extensions: 31592
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 30395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31583
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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