Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20604
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.7  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     25   2.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     25   2.3  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         25   3.0  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     25   3.0  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   9.3  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -3

Query: 584 YFCLSLVNVLYISSVMTKSLYVPGFSTEQTTIVLELLSSQTNVRSLL 444
           YF   +V  + ISS+      +P  S E+ T+ L +L SQT V SLL
Sbjct: 234 YFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILVSQT-VFSLL 279


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 223 VLNNRKF*EHAPVG-SIAWCFNMPYTWTRNFYFKKMLVF 336
           V +  +F ++ P G       N  Y +T+N YFK + +F
Sbjct: 643 VESGMRFYDNLPFGYPFDRVINFNYFYTKNMYFKDVFIF 681


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 223 VLNNRKF*EHAPVG-SIAWCFNMPYTWTRNFYFKKMLVF 336
           V +  +F ++ P G       N  Y +T+N YFK + +F
Sbjct: 643 VESGMRFYDNLPFGYPFDRVINFNYFYTKNMYFKDVFIF 681


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 NMPYTWTRNFYFKKMLVF 336
           N  Y +T+N YFK + +F
Sbjct: 664 NFNYFYTKNMYFKDVFIF 681


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 NMPYTWTRNFYFKKMLVF 336
           N  Y +T+N YFK + +F
Sbjct: 664 NFNYFYTKNMYFKDVFIF 681


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 262 GSIAWCFNMPYTWTRNFYFKKMLVFKYN 345
           G+IAW +N+P      ++F  ++V+ Y+
Sbjct: 231 GAIAWGYNLPLA----YFFTGLVVYIYS 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,472
Number of Sequences: 2352
Number of extensions: 14073
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)