Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20604
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC092500-1|AAH92500.1|  334|Homo sapiens TMCO7 protein protein.        39   0.015
AB051533-1|BAB21837.1| 1098|Homo sapiens KIAA1746 protein protein.     39   0.015

>BC092500-1|AAH92500.1|  334|Homo sapiens TMCO7 protein protein.
          Length = 334

 Score = 39.1 bits (87), Expect = 0.015
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
 Frame = +2

Query: 251 MLQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSILVDCTDFIHRSY 421
           +LQ V +LG+   L+PG+G+ +  R  F   +     F+ + +    +   C   ++ + 
Sbjct: 148 VLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQDVVCFDAAPDATRRLYTSCKALLNVAQ 207

Query: 422 EIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQ 517
              +  ++I   H  D  A L QL F P + +
Sbjct: 208 HTSL-GSLIFCHHFGDIAAGLCQLGFCPTKRK 238


>AB051533-1|BAB21837.1| 1098|Homo sapiens KIAA1746 protein protein.
          Length = 1098

 Score = 39.1 bits (87), Expect = 0.015
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
 Frame = +2

Query: 251 MLQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSILVDCTDFIHRSY 421
           +LQ V +LG+   L+PG+G+ +  R  F   +     F+ + +    +   C   ++ + 
Sbjct: 152 VLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQDVVCFDAAPDATRRLYTSCKALLNVAQ 211

Query: 422 EIPVYKNIIMTLHLSDYLAALIQLSFAPLRNQ 517
              +  ++I   H  D  A L QL F P + +
Sbjct: 212 HTSL-GSLIFCHHFGDIAAGLCQLGFCPTKRK 242


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,616,812
Number of Sequences: 237096
Number of extensions: 1745963
Number of successful extensions: 2805
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2805
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)