Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20602
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 41 9e-04
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.010
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 36 0.042
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 36 0.042
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 35 0.056
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 35 0.074
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 34 0.098
SB_732| Best HMM Match : AAA (HMM E-Value=0) 34 0.098
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 34 0.13
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 33 0.30
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 33 0.30
SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 31 0.69
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 30 2.1
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 30 2.1
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13630| Best HMM Match : RVP (HMM E-Value=0.27) 29 2.8
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 29 3.7
SB_7372| Best HMM Match : Rad17 (HMM E-Value=2.7e-09) 29 3.7
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 4.9
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 29 4.9
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 29 4.9
SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049) 28 6.4
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 28 6.4
SB_6155| Best HMM Match : SRP19 (HMM E-Value=0.95) 28 6.4
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 8.5
SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0) 28 8.5
SB_50008| Best HMM Match : SRP19 (HMM E-Value=4.6) 28 8.5
SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29) 28 8.5
SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1) 28 8.5
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 28 8.5
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 8.5
SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 28 8.5
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +1
Query: 256 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLME 405
A+L+AG PGTGKTAIA+ +AQ LG PF + GSE++S E+ KTE L +
Sbjct: 171 AVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEALTQ 220
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +2
Query: 113 AHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGQ 256
AHSHI+GLGLD+ Q++ G+VGQ +AR AAGI+++MI+ K+AG+
Sbjct: 123 AHSHIRGLGLDDALEARQVSQGMVGQVTARRAAGIILEMIKEGKIAGR 170
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 262 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 363
+L+GPPGTGKT +A A+A E G VPF + GSE
Sbjct: 85 ILSGPPGTGKTLLAKAVAGEAG--VPFLSISGSE 116
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 420
R LLL GPPGTGKT +A +A+E G + F + G E+ S I +E + + F RA
Sbjct: 701 RGGLLLYGPPGTGKTLLAGVVAKECG--LNFISIKGPELLSKYIGASEQAVRDMFTRA 756
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 262 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 363
LL GPPGTGKT +A A+A E VPF M GS+
Sbjct: 162 LLVGPPGTGKTLLAKAVATE--ADVPFLSMAGSD 193
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 420
+LLAGPPG GKT +A AIA E G + F + G E+ + + ++E + + F+RA
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPELLNMYVGESERAVRQVFQRA 72
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 420
+LL GP GTGKT IA A+A E G FC + G EV S +TE L E F A
Sbjct: 293 ILLYGPSGTGKTMIARAVANETGVHF-FC-INGPEVLSRYYGETEARLREIFTEA 345
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 420
R+ +LL GPPGTGKT +A A+A E + F + G E+ + + ++E + E F RA
Sbjct: 844 RSGVLLYGPPGTGKTLMAKAVATE--CSLNFLSVKGPELINMYVGQSEQNVREVFSRA 899
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 262 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS-TEIKKTEVLMENFRRAI 423
LL GPPG GKT +A AIA EL ++PF + +E+ S + E + E F A+
Sbjct: 714 LLHGPPGCGKTLLAHAIAGEL--EMPFLKLAATEIVSGVSGESEEKVRELFTSAV 766
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGT 330
+L+ GPPGTGKT +A A+A E GT
Sbjct: 286 VLMVGPPGTGKTMLAKAVATECGT 309
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 366
+LLAGPPG GKT +A AIA E G + F + G E+
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPEL 53
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 363
+LL G PGTGKT +A A+A E G VPF GSE
Sbjct: 167 VLLIGSPGTGKTLLAKAVAGEAG--VPFFFCSGSE 199
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 256 ALLLAGPPGTGKTAIALAIAQELG 327
A LL+GPPG GKT A + QELG
Sbjct: 273 AALLSGPPGVGKTTTATLVCQELG 296
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGS--EVYSTEIKKTEVLMENFRR 417
R ++L GPPG+GKT +A I + + P + S + + TE++KTE E +R
Sbjct: 1249 RIVIILRGPPGSGKTHVAKLIKDKEVSSGAHAPRILSLDDYFLTEVEKTEKDPETGKR 1306
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMV 354
LL GPPGTGKT+ LA+A++L F MV
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMV 44
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 35.1 bits (77), Expect = 0.056
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 366
+LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 214 VLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 247
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 34.7 bits (76), Expect = 0.074
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 366
+LL GPPGTGKT A A+A T F ++GSE+
Sbjct: 121 VLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 154
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 34.3 bits (75), Expect = 0.098
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 363
+LL GPPG GKT +A A+A T F +VGSE
Sbjct: 201 VLLYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 233
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 34.3 bits (75), Expect = 0.098
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE 393
+LL GPPGTGKT +A I L T+ P + G EV + + ++E
Sbjct: 185 ILLFGPPGTGKTLMARQIGTMLNTREPKI-ISGPEVLNKFVGESE 228
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 34.3 bits (75), Expect = 0.098
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 366
++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 417 VILYGQPGTGKTLLAKAVANQ--TSATFLRVVGSEL 450
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELG---TKVPFCPMVGSEVYSTEIKKTE 393
+L GPPGTGKT +A A+A E KV F G++ S + ++E
Sbjct: 921 VLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESE 968
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 262 LLAGPPGTGKTAIALAIAQELGTKV 336
LL GPPG GKT +A IAQ G V
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAGYNV 408
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 214 DSCRYDKK*EN---GRAALLLAGPPGTGKTAIALAIAQELGTK 333
D+ RYD N + +LL GP GTGKT++A + Q+L K
Sbjct: 1739 DTVRYDFLVYNLIQAKRPVLLTGPVGTGKTSVAQKVLQKLDPK 1781
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 256 ALLLAGPPGTGKTAIALAIAQELGTKV 336
A+L+ GP G GKTA A A ELG KV
Sbjct: 640 AMLVVGPRGAGKTASIYACAGELGYKV 666
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 366
LL GPPGTGKT A ++A+ G + + M G +V
Sbjct: 332 LLFYGPPGTGKTMFAKSLARHSG--MDYAVMTGGDV 365
>SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 256 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 363
A+L+ GP G GKTA A A ELG K C S+
Sbjct: 30 AMLVVGPRGAGKTASIYACAGELGYKDVECDTDASQ 65
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQEL-GTKVPFCPMVGSEVYSTEIKKTEVLME 405
R ++++AGPPGTGK++ A+ + L GS +++ +++K V M+
Sbjct: 1097 RTSIIVAGPPGTGKSSCISALIETLTECSATKHKNTGSPMHTHKLQKAIVYMD 1149
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 265 LAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTE----IKKTEVLMENFRRAI 423
+ GP G+GKTA+ LA+ + L C +V +++++ E + K + L E RA+
Sbjct: 28 IGGPVGSGKTALVLALCKYLRDSCNIC-VVTNDIFTKEDWEFLVKNKALDEKRMRAV 83
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 244 NGRAALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRR 417
NG +LL G PG GKT + + G K+ G++V+ ++E EN RR
Sbjct: 243 NGPKGILLVGAPGVGKTLLVHKATVDCGIKL--VSTNGTDVFGPHAGESE---ENLRR 295
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 244 NGRAALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRR 417
NG +LL G PG GKT + + G K+ G++V+ ++E EN RR
Sbjct: 73 NGPKGILLVGAPGVGKTLLVHKATVDCGIKL--VSTNGTDVFGPHAGESE---ENLRR 125
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 211 RDSCRYDKK*ENGRAALLLAGPPGTGKTAIALAIAQELGTKVPFC 345
+DS R DK + +LL GP G+GKT +A IA+ L C
Sbjct: 263 QDSIRLDK------SNILLLGPTGSGKTLLAQTIARCLDVPFAIC 301
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQE 321
+L GPPG GKT +A AIA E
Sbjct: 347 VLFYGPPGCGKTLLAKAIANE 367
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 262 LLAGPPGTGKTAIALAIAQEL 324
++ GPPGTGKT I L +A+ L
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVL 895
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI 381
+++ GP G GKTA+ +AI +E+ K + G+ + +I
Sbjct: 510 VMVTGPVGCGKTALLMAILKEIPLKQGSVTLCGTVAFVDQI 550
>SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQELGTK 333
R +L+ G PGTGK+ + +A LG K
Sbjct: 8 RPNILITGTPGTGKSTTGVELANRLGFK 35
>SB_13630| Best HMM Match : RVP (HMM E-Value=0.27)
Length = 373
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -2
Query: 662 TAPRISFNVNDIPNFNLL---LL*RFIYSWIK 576
T + FNV ++P+FNLL + + +Y WI+
Sbjct: 339 TQQELGFNVTELPDFNLLGRNAIKQLVYQWIR 370
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTK 333
+LL GPPG GKT + + Q L ++
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASR 78
>SB_7372| Best HMM Match : Rad17 (HMM E-Value=2.7e-09)
Length = 421
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 223 RYDKK*ENGRAALLLAGPPGTGKTAIALAIAQELGTKV 336
+Y E A LLL GP G GKTA + EL ++
Sbjct: 96 KYKPTTEPSNAILLLTGPVGAGKTATIHMLQTELSFEI 133
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 265 LAGPPGTGKTAIALAIAQEL 324
L GPPGTGKT L +A+ L
Sbjct: 869 LEGPPGTGKTTSILCLARAL 888
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 250 RAALLLAGPPGTGKTAIALAIAQEL 324
R LL GPPG GK++ A+A EL
Sbjct: 222 RRGYLLYGPPGCGKSSFIQALAGEL 246
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 265 LAGPPGTGKTAIALAIAQEL 324
+ GPPG GK+ +A+ +A EL
Sbjct: 132 ITGPPGFGKSCVAIHVAHEL 151
>SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049)
Length = 113
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 139 PQAFYMTVSRDPLRFSCAFHFFNFHVESSFTLLN 38
P YM R P R F+FF F + + T LN
Sbjct: 4 PSKAYMQTRRFPKRHISIFNFFTFSCKQAVTFLN 37
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELG 327
+LL G PG GKT++ AIA+ G
Sbjct: 1620 ILLEGSPGVGKTSLVSAIAKASG 1642
>SB_6155| Best HMM Match : SRP19 (HMM E-Value=0.95)
Length = 568
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 149 NGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGQLYS 265
N VP + L AREA G+ + + +K+A +LYS
Sbjct: 4 NSVPCEPREDLYNLLDAREATGLRISVPAYRKVADELYS 42
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVG 357
++L GP G GK+++ +AI E+ K F +G
Sbjct: 589 VILTGPVGGGKSSLLMAILGEIPLKRGFIKAIG 621
>SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0)
Length = 314
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 214 DSCRYDKK*ENGRAALLLAGPPGTGKTAIALAI 312
D C+ K +A++L++G GTGK IA AI
Sbjct: 176 DICKDTAKIALSQASVLISGESGTGKELIARAI 208
>SB_50008| Best HMM Match : SRP19 (HMM E-Value=4.6)
Length = 338
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 149 NGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGQLYS 265
N VP + L + AREA G+ + + +K+ +LYS
Sbjct: 113 NSVPCEPREDLYNRLDAREATGLRISVPAYRKVVDELYS 151
>SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29)
Length = 576
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 250 GHFLTSYHIYNYPCSLTCRLLTHETGCHLNRNTIFIQ 140
G F S H+ + PC L+ + T+E L+ +TIF++
Sbjct: 401 GGFCRSPHVQSMPCFLSGDMRTNENPGLLSMHTIFLR 437
>SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1)
Length = 607
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 149 NGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGQLYS 265
N VP + L + AREA G+ + + +K+ +LYS
Sbjct: 4 NSVPCEPREDLYNRLDAREATGLRISVPAYRKVVDELYS 42
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPM 351
+L ++G PGTGKTA + +++ +V CP+
Sbjct: 237 SLYISGAPGTGKTACLTMVIRDM-KEVSDCPV 267
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 259 LLLAGPPGTGKTAIALAIAQEL 324
+++AGPPGTGK++ A+ + L
Sbjct: 2 IIVAGPPGTGKSSCISALIETL 23
>SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 138 GWMKMVFLFKWQPVSWV 188
G++K FLF+++P SWV
Sbjct: 9 GYIKAYFLFEYEPTSWV 25
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 265 LAGPPGTGKTAIALAIAQELGTKVP 339
+ GPPGTGKT +A+ I + P
Sbjct: 590 VVGPPGTGKTDVAVQIISNIYHNFP 614
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 244 NGRAALLLAGPPGTGKTAIA-LAIAQELGTKVPFCPMVGSEVY 369
N LLL P G GKT +A L I +E+G + + +E +
Sbjct: 1126 NSDENLLLCAPTGAGKTNVALLTILREIGKHINLDGTINTEEF 1168
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,644,986
Number of Sequences: 59808
Number of extensions: 409963
Number of successful extensions: 1330
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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