Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20601
(536 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 30 0.015
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 30 0.015
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 30 0.015
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 30 0.015
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 30 0.015
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 30 0.015
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 30 0.015
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 30 0.015
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 27 0.10
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 24 0.74
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 24 0.74
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 3.0
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 3.0
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 3.0
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 3.0
DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory pro... 21 6.9
AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical pro... 21 6.9
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 9.1
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 9.1
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 9.1
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.015
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 252 AINTYPQNNYAPPQNS-YYPQNTYAPP 329
A +TYP Y+PPQ + YPQ+ YA P
Sbjct: 34 ANSTYPPACYSPPQVAPQYPQHPYAAP 60
Score = 25.8 bits (54), Expect = 0.24
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 279 YAPPQNSYYPQNTYAPPQ 332
Y P NS YP Y+PPQ
Sbjct: 30 YNPNANSTYPPACYSPPQ 47
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 27.1 bits (57), Expect = 0.10
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 399 LGRELL*SKSDMKACSRWDDRCFEEVHRYSEDSMSFEGGRN 277
L RE+ K D++ RW DR + +H + S++ E GR+
Sbjct: 294 LNREVDQIKQDVEDLKRWSDRIYAAIH---QGSVTDERGRS 331
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 24.2 bits (50), Expect = 0.74
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 FEPEPAYPVETSKYVERST---QADPAINTYPQNNYAPPQNSYYPQNTYAPPQN 335
+ PE E YV +T Q ++ Q NY PQ YY + +N
Sbjct: 317 YNPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSEN 370
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 24.2 bits (50), Expect = 0.74
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +3
Query: 183 FEPEPAYPVETSKYVERST---QADPAINTYPQNNYAPPQNSYYPQNTYAPPQN 335
+ PE E YV +T Q ++ Q NY PQ YY + +N
Sbjct: 265 YNPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSEN 318
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P Y QN+Y PP ++ + Q Y
Sbjct: 32 PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P Y QN+Y PP ++ + Q Y
Sbjct: 32 PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P Y QN+Y PP ++ + Q Y
Sbjct: 32 PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P Y QN+Y PP ++ + Q Y
Sbjct: 32 PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62
>DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory
protein 2 protein.
Length = 122
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +3
Query: 168 QLVRTFEPEPAYPVETSKYVER 233
QL+ ++P+ Y + + Y+E+
Sbjct: 100 QLISVYDPKGEYQTQYAHYLEK 121
>AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical
protein protein.
Length = 122
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +3
Query: 168 QLVRTFEPEPAYPVETSKYVER 233
QL+ ++P+ Y + + Y+E+
Sbjct: 100 QLISVYDPKGEYQTQYAHYLEK 121
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 20.6 bits (41), Expect = 9.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -3
Query: 333 FEEVHRYSEDSMSFEG 286
++ +HRY E+++ +G
Sbjct: 159 YQHLHRYKEEALQGDG 174
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 20.6 bits (41), Expect = 9.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -3
Query: 333 FEEVHRYSEDSMSFEG 286
++ +HRY E+++ +G
Sbjct: 159 YQHLHRYKEEALQGDG 174
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 20.6 bits (41), Expect = 9.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -3
Query: 333 FEEVHRYSEDSMSFEG 286
++ +HRY E+++ +G
Sbjct: 159 YQHLHRYKEEALQGDG 174
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,178
Number of Sequences: 336
Number of extensions: 2287
Number of successful extensions: 32
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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