Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20601
(536 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 33 0.020
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 32 0.047
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 30 0.25
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 29 0.33
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.58
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 27 1.3
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 4.1
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.1
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 25 7.2
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 7.2
SPBC1289.09 |tim21||mitochondrial inner membrane presequence tra... 25 7.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 7.2
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.2
SPAP27G11.12 |||human down-regulated in multiple cancers-1 homol... 25 9.5
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 9.5
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.5
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 25 9.5
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 9.5
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 33.5 bits (73), Expect = 0.020
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 222 YVERSTQADPAINTYPQNNYAPPQNSYYPQNTYAPPQ 332
Y ++ P Y NY PPQ + YPQ YAPPQ
Sbjct: 7 YGDKGYAPAPPQQAYGGPNYYPPQQN-YPQQGYAPPQ 42
Score = 31.9 bits (69), Expect = 0.062
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P YPQ YAPPQ YPQ Y Q Y
Sbjct: 28 PPQQNYPQQGYAPPQG--YPQGGYPAQQPMY 56
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 282 APPQNSYYPQNTYAPPQN 335
APPQ +Y N Y P QN
Sbjct: 15 APPQQAYGGPNYYPPQQN 32
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 32.3 bits (70), Expect = 0.047
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +3
Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341
P P P S V S D N Y + PP +PQ +Y P ++
Sbjct: 309 PSPCCPSTPSSAVTLSNGFDSQSNAYNNSGTGPPMLYKFPQRSYTAPNTSF 359
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 29.9 bits (64), Expect = 0.25
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 168 QLVRTFEPEPAYPVETSKYVERSTQADPAINTYPQNNYAPPQNSYYPQNT 317
+L+RT+ P YP E +K + S +AD +N N P S +NT
Sbjct: 159 ELIRTYFPND-YPKEANKDIPSSAEADTMLNLESSENREQP-TSLKEENT 206
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 29.5 bits (63), Expect = 0.33
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 162 CIQLVRTFEPEPAYPVETSKYVER-STQADPAINTYPQNNYAPPQNSYYPQN 314
CIQ +RTF+ + PV T + S I+ P+ + +PP S + +N
Sbjct: 110 CIQQLRTFQQQGYIPVITWPNTDSPSATTSSPISRNPEYSVSPPNGSKFVKN 161
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNY-APPQNSYYP-QNTYAPP 329
P PA ++ + Q P YPQ Y P Q +YYP Q YA P
Sbjct: 84 PAPAPAASQNRAYGAAPQPYPPQGGYPQQPYYYPNQPNYYPAQPAYAQP 132
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 393 VPVIKNEMYYGDNGSYKYEYQIADGTHVGEEGYFTNP 503
VP+ + YG + SY YE I + T+ + Y +P
Sbjct: 272 VPLPSSTNTYGPSNSYGYEININESTNHVDSSYLPHP 308
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/53 (28%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = +3
Query: 162 CIQLVRTFEPEPAYPVETSKYVERSTQAD----PAINTYPQNNYAPPQNSYYP 308
C L R P P Y ++ Q I YP Y P QN +P
Sbjct: 298 CKNLTRRLRPAPLVSSRYLAYQQQQQQQQMNLQQGIQGYPHQGYMPTQNIGFP 350
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 255 INTYPQNNYAPPQNSYYPQNTYA 323
IN P+ + PP +SY+P+ +A
Sbjct: 60 INNDPKVRFLPPVDSYHPKRNHA 82
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 482 LAYVCSIGDLILVFVTAIITIIHF 411
+ ++ +IGD +F T I+T + F
Sbjct: 472 IGFITAIGDFAWIFTTIIVTTVAF 495
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 240 QADPAINTYPQNNYAPPQNSYYPQNTYAPP 329
+A P P+ + PQ++Y P Y P
Sbjct: 49 RARPGATAVPRRSPTSPQSAYVPATVYTSP 78
>SPBC1289.09 |tim21||mitochondrial inner membrane presequence
translocase complex subunit Tim21 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 432 GSYKYEYQIADGTHVGEEGYFTNPNTKRQ 518
G YK+EY D + G+ F + N+ RQ
Sbjct: 177 GDYKWEYLFVDVANYGKIIIFDHTNSVRQ 205
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNYAP---PQNSYYPQNTYAP 326
P P PV V +++ + N P N Y P ++ P +TY P
Sbjct: 954 PNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKP 1002
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 518 LPLRIGIREVAFLAYVCSIGDLILVFVTAIITIIH 414
LP I I + + Y S+G ++ F +I +IH
Sbjct: 1255 LPFHIQIGHIDAVNYCISLGSELITFSDELIRLIH 1289
>SPAP27G11.12 |||human down-regulated in multiple cancers-1 homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 797
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 165 IQLVRTFEPEPAYPVETSKY 224
++ VR+ P P YP+E+S++
Sbjct: 587 LRYVRSKSPTPYYPIESSEF 606
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 138 LRPQHGC*CIQLVRTFEPEPAYPV 209
L P+ GC C+ + PE +PV
Sbjct: 116 LTPKFGCVCVSVDYRLAPESKFPV 139
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 525 TRLASSY-WDS*SSLPRLRVFHRRFDTR 445
TR S + WD S P ++FH++FD +
Sbjct: 455 TRSFSRFSWDMFSESPVYQLFHKKFDVQ 482
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 189 PEPAYPVETSKY---VERSTQADPAINTYPQNNYAPPQNSYYPQNT-YAPPQNTYR 344
P+P++P Y + +QA+P + Q + PPQ S+ P + Y ++YR
Sbjct: 460 PQPSFPPFHPIYNDSIGYYSQANPQMYYANQVSAPPPQGSFDPNSKFYRNSSDSYR 515
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 329 SKHLSSHLEHAFISDFDYNNSR 394
+K +SH+ +AFIS FD+ R
Sbjct: 605 TKGSNSHILNAFISAFDFKGKR 626
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,982,075
Number of Sequences: 5004
Number of extensions: 36663
Number of successful extensions: 138
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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