BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20601 (536 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 33 0.020 SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 32 0.047 SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 30 0.25 SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 29 0.33 SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.58 SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 27 1.3 SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 4.1 SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.1 SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 25 7.2 SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 7.2 SPBC1289.09 |tim21||mitochondrial inner membrane presequence tra... 25 7.2 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 7.2 SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.2 SPAP27G11.12 |||human down-regulated in multiple cancers-1 homol... 25 9.5 SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 9.5 SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.5 SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 25 9.5 SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 9.5 >SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces pombe|chr 2|||Manual Length = 87 Score = 33.5 bits (73), Expect = 0.020 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +3 Query: 222 YVERSTQADPAINTYPQNNYAPPQNSYYPQNTYAPPQ 332 Y ++ P Y NY PPQ + YPQ YAPPQ Sbjct: 7 YGDKGYAPAPPQQAYGGPNYYPPQQN-YPQQGYAPPQ 42 Score = 31.9 bits (69), Expect = 0.062 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +3 Query: 249 PAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341 P YPQ YAPPQ YPQ Y Q Y Sbjct: 28 PPQQNYPQQGYAPPQG--YPQGGYPAQQPMY 56 Score = 25.0 bits (52), Expect = 7.2 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +3 Query: 282 APPQNSYYPQNTYAPPQN 335 APPQ +Y N Y P QN Sbjct: 15 APPQQAYGGPNYYPPQQN 32 >SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccharomyces pombe|chr 1|||Manual Length = 569 Score = 32.3 bits (70), Expect = 0.047 Identities = 15/51 (29%), Positives = 20/51 (39%) Frame = +3 Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNYAPPQNSYYPQNTYAPPQNTY 341 P P P S V S D N Y + PP +PQ +Y P ++ Sbjct: 309 PSPCCPSTPSSAVTLSNGFDSQSNAYNNSGTGPPMLYKFPQRSYTAPNTSF 359 >SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 271 Score = 29.9 bits (64), Expect = 0.25 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +3 Query: 168 QLVRTFEPEPAYPVETSKYVERSTQADPAINTYPQNNYAPPQNSYYPQNT 317 +L+RT+ P YP E +K + S +AD +N N P S +NT Sbjct: 159 ELIRTYFPND-YPKEANKDIPSSAEADTMLNLESSENREQP-TSLKEENT 206 >SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 803 Score = 29.5 bits (63), Expect = 0.33 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 162 CIQLVRTFEPEPAYPVETSKYVER-STQADPAINTYPQNNYAPPQNSYYPQN 314 CIQ +RTF+ + PV T + S I+ P+ + +PP S + +N Sbjct: 110 CIQQLRTFQQQGYIPVITWPNTDSPSATTSSPISRNPEYSVSPPNGSKFVKN 161 >SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 204 Score = 28.7 bits (61), Expect = 0.58 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = +3 Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNY-APPQNSYYP-QNTYAPP 329 P PA ++ + Q P YPQ Y P Q +YYP Q YA P Sbjct: 84 PAPAPAASQNRAYGAAPQPYPPQGGYPQQPYYYPNQPNYYPAQPAYAQP 132 >SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 411 Score = 27.5 bits (58), Expect = 1.3 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +3 Query: 393 VPVIKNEMYYGDNGSYKYEYQIADGTHVGEEGYFTNP 503 VP+ + YG + SY YE I + T+ + Y +P Sbjct: 272 VPLPSSTNTYGPSNSYGYEININESTNHVDSSYLPHP 308 >SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schizosaccharomyces pombe|chr 2|||Manual Length = 470 Score = 25.8 bits (54), Expect = 4.1 Identities = 15/53 (28%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Frame = +3 Query: 162 CIQLVRTFEPEPAYPVETSKYVERSTQAD----PAINTYPQNNYAPPQNSYYP 308 C L R P P Y ++ Q I YP Y P QN +P Sbjct: 298 CKNLTRRLRPAPLVSSRYLAYQQQQQQQQMNLQQGIQGYPHQGYMPTQNIGFP 350 >SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 659 Score = 25.8 bits (54), Expect = 4.1 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +3 Query: 255 INTYPQNNYAPPQNSYYPQNTYA 323 IN P+ + PP +SY+P+ +A Sbjct: 60 INNDPKVRFLPPVDSYHPKRNHA 82 >SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr 2|||Manual Length = 1465 Score = 25.0 bits (52), Expect = 7.2 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -1 Query: 482 LAYVCSIGDLILVFVTAIITIIHF 411 + ++ +IGD +F T I+T + F Sbjct: 472 IGFITAIGDFAWIFTTIIVTTVAF 495 >SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 155 Score = 25.0 bits (52), Expect = 7.2 Identities = 9/30 (30%), Positives = 14/30 (46%) Frame = +3 Query: 240 QADPAINTYPQNNYAPPQNSYYPQNTYAPP 329 +A P P+ + PQ++Y P Y P Sbjct: 49 RARPGATAVPRRSPTSPQSAYVPATVYTSP 78 >SPBC1289.09 |tim21||mitochondrial inner membrane presequence translocase complex subunit Tim21 |Schizosaccharomyces pombe|chr 2|||Manual Length = 223 Score = 25.0 bits (52), Expect = 7.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 432 GSYKYEYQIADGTHVGEEGYFTNPNTKRQ 518 G YK+EY D + G+ F + N+ RQ Sbjct: 177 GDYKWEYLFVDVANYGKIIIFDHTNSVRQ 205 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 25.0 bits (52), Expect = 7.2 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Frame = +3 Query: 189 PEPAYPVETSKYVERSTQADPAINTYPQNNYAP---PQNSYYPQNTYAP 326 P P PV V +++ + N P N Y P ++ P +TY P Sbjct: 954 PNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKP 1002 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 25.0 bits (52), Expect = 7.2 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -1 Query: 518 LPLRIGIREVAFLAYVCSIGDLILVFVTAIITIIH 414 LP I I + + Y S+G ++ F +I +IH Sbjct: 1255 LPFHIQIGHIDAVNYCISLGSELITFSDELIRLIH 1289 >SPAP27G11.12 |||human down-regulated in multiple cancers-1 homolog 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 797 Score = 24.6 bits (51), Expect = 9.5 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +3 Query: 165 IQLVRTFEPEPAYPVETSKY 224 ++ VR+ P P YP+E+S++ Sbjct: 587 LRYVRSKSPTPYYPIESSEF 606 >SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 339 Score = 24.6 bits (51), Expect = 9.5 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 Query: 138 LRPQHGC*CIQLVRTFEPEPAYPV 209 L P+ GC C+ + PE +PV Sbjct: 116 LTPKFGCVCVSVDYRLAPESKFPV 139 >SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1029 Score = 24.6 bits (51), Expect = 9.5 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = -3 Query: 525 TRLASSY-WDS*SSLPRLRVFHRRFDTR 445 TR S + WD S P ++FH++FD + Sbjct: 455 TRSFSRFSWDMFSESPVYQLFHKKFDVQ 482 >SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 24.6 bits (51), Expect = 9.5 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +3 Query: 189 PEPAYPVETSKY---VERSTQADPAINTYPQNNYAPPQNSYYPQNT-YAPPQNTYR 344 P+P++P Y + +QA+P + Q + PPQ S+ P + Y ++YR Sbjct: 460 PQPSFPPFHPIYNDSIGYYSQANPQMYYANQVSAPPPQGSFDPNSKFYRNSSDSYR 515 >SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces pombe|chr 2|||Manual Length = 1462 Score = 24.6 bits (51), Expect = 9.5 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 329 SKHLSSHLEHAFISDFDYNNSR 394 +K +SH+ +AFIS FD+ R Sbjct: 605 TKGSNSHILNAFISAFDFKGKR 626 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,982,075 Number of Sequences: 5004 Number of extensions: 36663 Number of successful extensions: 138 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 136 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 222442660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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