Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20600
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.3  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 396 MVDIAILLGADKTKATEELKESLQF 470
           MV ++I+LG+ KTK   +L    Q+
Sbjct: 90  MVLVSIILGSLKTKEWAKLNNKFQY 114


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 467 IRNEISQHFVTSGKRRNATSL---YNPMTIAELQQKFPKVPWL 586
           +R+E+++ +  +G+      L   Y  M I+E  +K+P  P+L
Sbjct: 324 LRHEVTEIYNENGEFTYENILGMKYLDMVISETLRKYPLAPFL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,836
Number of Sequences: 336
Number of extensions: 3222
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)